Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1259 ATGATAACCTTGCTGGACCTGTACCATGTTCTCACCGCGGTGGTGCCGCTCTACGTCGCCATGATCCTCGCCTACGGTTCCGTCAAGTGGTGGAAGATCTTCACCCCGGACCAATGCTCCGGCATCAACCGCTTCGTCGCGCTCTTTGCGGTGCCCCTACTCTCCTTCCACTTCATCTCCACCAACAATCCCTACGCCATGAACTACAAGTTCATAGCTGCGGATTCGCTTCAGAAAACCATAGTCCTTGCCGTGCTCTTCGTCTGGTCCAGAACCAGCTCACGGGGCTCTCTGGAATGGTCCATCACGCTCTTCTCCCTCTCCACGCTCCCCAACACGCTCGTCATGGGGATCCCATTACTTAAGGGCATGTACGGGGACGCATCGGGGACCCTCATGGTGCAGATAGTGGTGCTTCAGTGCATCATCTGGTACACTCTGATGCTGTTTTTGTTTGAGTATAGGGGTGCCAAGCTTCTCATCGTGGAGCAGTTTCCCGACACTGCAGGGTCCATTATCTCGTTCAAGGTTGACTCTGATATCTTATCTTTGGATGGGAAGGAACCGCTTCAGACTGAAGCTGAGGTTGGTGACGATGGCAAGCTTCATGTTACTGTCAGAAAGTCCACCAGTTCGCGCTCTGAGATCTTCTCGCGGCGCTCGCATGGTCCCAACTCGGTTTCGTTGACTCCGAGGCCTTCCAATTTAACCAATGCAGAGATTTACTCGCTGCAGTCTTCCAGGAATCCAACGCCGAGAGGGTCCAGTTTCAACCATACGGACTTCTACTCGATGGTGAATAATGGGAGGAACGTGAGTCCGAGGCAGAGTAGTTTTGGGGGCGTGGCATTTGATGAGGAGAGTGGTGTGAGGGTTAATGGGGGTGCAGGAGGGTACCCTGCACCTCACAATGCGGGGATTTTTTCTCCGGTGGGGAAGAAGAAAGGTGGTGGTGGTGGTGAAGGGGGAGGGAAGGATCTTCACATGTTTGTCTGGAGTTCTAGTGCTTCTCCGGTGTCGGAAGGCGGGATTCATGTGTTCAGAGGTGGGGATTATGGAAATGACCAACTTCCTGTTGGTGGGGTGGCTCACCCGAAAGACTATGATGATTTTGGTCACGACGAGTTTAGCTTCGGGAACGGAACCGTCCCTAATGGAGTGGAGAAGGAAGGGCCAGTACTTTCGAAGCTTGGCTCAAGTTCGACGGCTGAGCTTCACCCAAAAGCACAAGTTGAATCCAAAGCCACGTCCATGCCACCCACAAGTGTTATGACAAGACTCATTCTGATTATGGTTTGGAGAAAGCTGATTAGGAACCCCAACACATATTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCTGCTATTGTTGCTCGATCGATATCAATTTTATCTGATGCTGGCCTTGGGATGGCAATGTTTAGCCTAGGGTTATTCATGGCTTTGCAACCAAAGATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTCCTCACTGGACCCGCTGTCATGGCTGTCGCTTCAATAGTTGTAGGGCTCAGGGGAGTTCTGTTGCACATTGCTATTGTACAGGCTGCTCTGCCCCAAGGGATTGTCCCTTTTGTGTTTGCCAAGGAATACAACGTTCATCCAGACATCCTTAGCACAGGGGTTATATTTGGGATGTTAATTGCTCTTCCTATCACGCTAGTTTACTACATTTTGCTTGGGCTTTGA 1758 0.5085 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKTIVLAVLFVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGAKLLIVEQFPDTAGSIISFKVDSDILSLDGKEPLQTEAEVGDDGKLHVTVRKSTSSRSEIFSRRSHGPNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNNGRNVSPRQSSFGGVAFDEESGVRVNGGAGGYPAPHNAGIFSPVGKKKGGGGGEGGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNDQLPVGGVAHPKDYDDFGHDEFSFGNGTVPNGVEKEGPVLSKLGSSSTAELHPKAQVESKATSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVARSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1259 585 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 585 - -
Pvu1g1259 585 MobiDBLite consensus disorder prediction 213 232 - -
Pvu1g1259 585 Pfam Membrane transport protein 9 580 IPR004776 GO:0016021|GO:0055085
Pvu1g1259 585 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 585 - -
Pvu1g1259 585 TIGRFAM 2a69: auxin efflux carrier 1 585 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1259 Pvu-Chr1 34187963 34191313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1259 1 576 Organic Solute Cotransporters AT1G73590 66.137 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1259 K13947 - gmx:100820506 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1259 1 34187963 34191313 Pvu1g1259 1 34187963 34191313 ECH