Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1258 ATGGCTTTGCATAAGATTCTACAAAGGGGTCGTCCATTCTTCAATCCTTCTCTGCAACTTGCTACTTCCTTTTCACCTTCTTCAGCTTCTCACACATTTCCCACTTGTGGGGATGAATCTCTTCACGTTCGGGAAATCACAAACACAAGAGAGGTTAGGAATGAATTTGACAAATACCATATATCTCAATGCCTCAACTGGACTTCAAGGCCAAATTACTGTAGTCATGATTCATGCTATGTGATAAATCGTCATTTTACATCTGATCGCAATGATATATGCACAAAGGGATTCTCAAGCAAGCTTCTTAAAACTATTCCATACTATGTAAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGCTATTATTCCTACTAATGTAAAAGTTGAGTTAATACAACTACTGGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACAAGTTTTGTCTCACCAAAATGGGTACCCCAGTTGGCAGATGCAAAGGATGTGTTGGCAGCAATTCAAAATGTTGAAGGTGCTAGGTTTCCTGTCTTGACTCCAAACATTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCAAAAGCAAATTTAAATTGTGGCATTGAAGAAAATCTTGCTCGTTGCCGTGATATTGCTTCAGCTGCTGGAAGCCTCTCGATCCCAGTTCGTGGATATATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAATATTGCCCCAGAGAAAGTAGCATATGTGGCAAAATCACTGTATGAGATGGGTTGCGCAGAGATTTCACTGGGTGATACAATTGGTGTAGGCACACCTGGTACTGTCATTCGGATGCTTGAAGCTGTTGTCGATGTTGTTCCAATTGACATGCTTGCTGTCCATTTTCACGATACTTATGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGTATCAGCACAGTGGATTCATCTGTTGCTGGTCTTGGAGGTTGTCCATATGCGAAGGGTGCAACTGGGAATGTAGCCACTGAGGATGTCGTATACATGCTGAATGGACTTGGAGTGAAAACAAACGTGGACCTTGGAAAGCTTATGCTTGCTGGGGATTTCATTTGCAGACATTTAGGACGTGCATCTGGTTCCAAAGCAGCTACTGCTTTGAGTAAAGTTACTAGTCATGCCTCCAAACTATGA 1230 0.4203 MALHKILQRGRPFFNPSLQLATSFSPSSASHTFPTCGDESLHVREITNTREVRNEFDKYHISQCLNWTSRPNYCSHDSCYVINRHFTSDRNDICTKGFSSKLLKTIPYYVKIVEVGARDGLQNEKAIIPTNVKVELIQLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQNVEGARFPVLTPNIKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEENLARCRDIASAAGSLSIPVRGYISCVVGCPLEGNIAPEKVAYVAKSLYEMGCAEISLGDTIGVGTPGTVIRMLEAVVDVVPIDMLAVHFHDTYGQALSNILISLQMGISTVDSSVAGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICRHLGRASGSKAATALSKVTSHASKL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1258 409 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 40 409 - -
Pvu1g1258 409 ProSiteProfiles Pyruvate carboxyltransferase domain. 110 377 IPR000891 GO:0003824
Pvu1g1258 409 SUPERFAMILY Aldolase 106 403 - -
Pvu1g1258 409 Gene3D Aldolase class I 104 402 IPR013785 -
Pvu1g1258 409 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 40 409 IPR043594 GO:0016833
Pvu1g1258 409 ProSitePatterns Hydroxymethylglutaryl-coenzyme A lyase active site. 336 345 IPR000138 GO:0004419
Pvu1g1258 409 CDD DRE_TIM_HMGL 112 385 - -
Pvu1g1258 409 Pfam HMGL-like 110 382 IPR000891 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1258 Pvu-Chr1 34109873 34118582 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1258 K01640 - gmx:100801507 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1258 1 34109873 34118582 Pvu1g1258 1 34109873 34118582 ECH