Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1255 ATGCTACCTCAGTCATTTACTATGATTGCAACAATAATTATTGTTCTTGCACAAACACTTGTGGGAGTGAGTTCACTTCCTGAATCTGATCAAATAAGCAATTTGCCGGGGCAACCTCAGGTCAAATTTCAGCAATATTCTGGCCACATTACTGTGGATGATCAGCACCAGAGAGCATTGTTTTACTACTTTGTTGAAGCAGAAGAAGACCCTGCTTCCAAGCCATTAGTTCTGTGGTTGAATGGAGGGCCCGGTTGTTCATCGATTGGAGTTGGAGCTTTTGCTGAGCATGGCCCTTTCAGACCGAGTGACAACAATGTTCTTGAGAAAAATGATTACAGTTGGAACAAAGAGGCAAATGTGCTATACCTGGAGTCACCAGCTGGCGTTGGATTCTCTTACTCTAGCAATAAATCGTTCTATATATTAGTGACAGATGAAATTACAGCCAGGGATAATCTTGTGTTCCTACAGCGTTGGTTCACTAAATTTCCTGAGTACTCAAATAACGACTTCTTCATTACTGGGGAGAGCTATGGAGGTCACTATGTTCCACAACTTGCACAACTTATTGTTCAAACCAAGACCCACTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTGGAGTTCAATACTGATTTCAACGCCAGATCTGAGTATTTTTGGTCTCACGGACTGATATCAGATTCAACATTCGAAATCCTAACTAGAGTCTGCAACTATTCCTCAATTAGGAGACAACGTCAAAATGGGAATCTTGGAGGGGTTTGTGAAAAAGCAAGCAAGCAATTGTATGCTGAGGTTAGCGACTATGTAGATGAATATGATGTCACTCTCGATGTTTGTTTGTCATCAGTAAATCAACAGGCTTATGTGCTGCATCAACTGCAAGAGACACAAAAGATAGATGTTTGTGTTGGTGATAAAACGATCACATACTTGAACAGGAAAGAAGTCCAAGAAGCTCTACATGCTAAACTTGTAGGAGTCACCAAATGGTCAACTTGCAGTTCAGTTCTGCATTATGACTATAGTAATCTAGAAATACCAACAATTCCTATCCTAGGGTCACTTGTTAAGTCTGGCATCAGGGTCCTGGTATACAGTGGTGATCAAGACTCAGTGATTCCATTAATAAGTTCGAGATATCTAGTGAACGGATTAGCCAAGGAAATTGGACTTGAGACAACAGTGGCCTATAGAGCCTGGTTTGAGGAAAAACAGGTAGCAGGATGGACACAAACATATGGGGACATGTTATCATATGCCACCATAAGAGGAGCATCTCATGAAGCTCCCTTTACTCAACCTCAAAGATCACTAGTGCTACTCAAAGCATTTCTAGACGGAAAACAACTGCCTAGTGTTAAATGA 1380 0.4123 MLPQSFTMIATIIIVLAQTLVGVSSLPESDQISNLPGQPQVKFQQYSGHITVDDQHQRALFYYFVEAEEDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFRPSDNNVLEKNDYSWNKEANVLYLESPAGVGFSYSSNKSFYILVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYGGHYVPQLAQLIVQTKTHFNLKGIAIGNPLLEFNTDFNARSEYFWSHGLISDSTFEILTRVCNYSSIRRQRQNGNLGGVCEKASKQLYAEVSDYVDEYDVTLDVCLSSVNQQAYVLHQLQETQKIDVCVGDKTITYLNRKEVQEALHAKLVGVTKWSTCSSVLHYDYSNLEIPTIPILGSLVKSGIRVLVYSGDQDSVIPLISSRYLVNGLAKEIGLETTVAYRAWFEEKQVAGWTQTYGDMLSYATIRGASHEAPFTQPQRSLVLLKAFLDGKQLPSVK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1255 459 Gene3D alpha/beta hydrolase 27 286 IPR029058 -
Pvu1g1255 459 Gene3D - 353 452 - -
Pvu1g1255 459 Gene3D - 307 343 - -
Pvu1g1255 459 PANTHER CARBOXYPEPTIDASE 6 457 - -
Pvu1g1255 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 457 IPR001563 GO:0004185|GO:0006508
Pvu1g1255 459 SUPERFAMILY alpha/beta-Hydrolases 33 455 IPR029058 -
Pvu1g1255 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pvu1g1255 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pvu1g1255 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pvu1g1255 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Pvu1g1255 459 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Pvu1g1255 459 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Pvu1g1255 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1255 Pvu-Chr1 34074388 34077675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1255 315 455 Calmodulin-binding Proteins AT2G22960 31.915 1.78e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1255 K16297 - gmx:100799900 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1255 1 34074388 34077675 Pvu11g0870 11 8129070 8131920 ECH
Pvu1g1255 1 34074388 34077675 Pvu1g1255 1 34074388 34077675 ECH