Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1242 ATGGATTCGGCTTGTCTCTCCAACGATTCGGTTTCTGGATTCAAAGACAAGGAGTCAATGGTTGACCCCTTTTTAGTCGAGGCTCTCCAGAACCCTCGTCACCGCCTTACCATTTTGCGGATGGAGCTGGACATTCAGAGGTTTATGAATAATGCTGATCAACAGCATTTTGAGTTTCCACATTTCCCTTCTTCCTATCTCAGATTGGCTGCGCATCGTGTTGCTCAACATTACAGCTTGCAAACAATGGTTCAAGATAATGGCTTAGATGGTCAGGGAAGTAAAATTCTGGTGAGAAAGTTACCAGAGAGAAAGTATCCTGTGGTTCGGTTATCTGAAATACCTGCAAAGCAATTGGAAAATGATAAATCTGAGCAGAAAAAATTTGTTATTAGACCTAGGCCTAATAAAAATAGTTTGAATGATGCTAATGGAGTTGGGAAGAAAGGAAATCCTGTAAGAAGTGTGGAAGAGAGGAAGGAAGAATATGACCGAGCACGGGCACGTATCTTTAGTGGCTCTAGAATCTCTGACTCAGGTGATACCTTAACCATGGTTCCAATGGATGGGAGAAATTCTTCTTCTAGCAAGGATGTGAGTGAAACTAACAAGAACCCCGTGGCTGATTCAGAAAGATTTATCAGTGTTAGGGATATTTGTGCAAATCGAGTTGCCATATTCAGGGATAGGGAAAAGGATCGTAGTGATCCAGATTATGACCGTAGTTATGGAAGGTATGCTAGGAGTATTCCAACCTCTGCTGTTAACTTGGTGCCATTTAACTTGCAAAAAGTTCAACCTTCATTTGCTCAATATGATGCTACATTTAATCAGTTGGGTCAGATGTCACAAACTCAGGCCACACATGGCTATGTACCTCCTTCTACCCCGATAATGAATCCTTTTTGCACCACAGGATTGAATCAGACACCTACAGACGGTGCTTACCTACAGTGGCCTAGTGCTGCTATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCTTTGAGCTTTGACTATTCGCAGAACTATTAG 1068 0.4213 MDSACLSNDSVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQHFEFPHFPSSYLRLAAHRVAQHYSLQTMVQDNGLDGQGSKILVRKLPERKYPVVRLSEIPAKQLENDKSEQKKFVIRPRPNKNSLNDANGVGKKGNPVRSVEERKEEYDRARARIFSGSRISDSGDTLTMVPMDGRNSSSSKDVSETNKNPVADSERFISVRDICANRVAIFRDREKDRSDPDYDRSYGRYARSIPTSAVNLVPFNLQKVQPSFAQYDATFNQLGQMSQTQATHGYVPPSTPIMNPFCTTGLNQTPTDGAYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1242 355 CDD R3H_encore_like 34 100 - -
Pvu1g1242 355 Pfam R3H domain 37 88 IPR001374 GO:0003676
Pvu1g1242 355 Gene3D - 11 135 IPR036867 GO:0003676
Pvu1g1242 355 Pfam SUZ domain 125 174 IPR024771 -
Pvu1g1242 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 7 354 - -
Pvu1g1242 355 PANTHER OS05G0411600 PROTEIN 7 354 - -
Pvu1g1242 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Pvu1g1242 355 SUPERFAMILY R3H domain 8 136 IPR036867 GO:0003676
Pvu1g1242 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Pvu1g1242 355 MobiDBLite consensus disorder prediction 179 206 - -
Pvu1g1242 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Pvu1g1242 355 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1242 Pvu-Chr1 33657613 33660876 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1242 - - gmx:100796710 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1242 1 33657613 33660876 Pvu1g1242 1 33657613 33660876 ECH