Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1238 GTCTCAACTTTTCATGCTTTCAGAGCCTCAACTTCTGAGTATGTTTCCTCCCAGCACACACCCAGAAGGGAATTCTTGAAGGGTCTTGCTTTGATGCCTCTTCTTCCTCTTGTGCTGAGAGAGCCACCCCCTTCTCATGCTAGAGAAGTTGAGGTTGGATCCTTCCTCCCGCCCTCACCCTCTGACCCATCTTTCGTTCTCTTCACGGCATCTCCCAAGGACACTCCCGCCCTTCGAGCAGGAAATGTGCAGCCATACAAGTTTATCCTCCCCCCAACTTGGAAACAGGCTCGTGTAGCAAACATATTATCTGGAAATTACTGTCAGCCAAAATGTGCAGAGCCCTGGGTGGAGGTTAAGTTTGAAGATGAAAAACAGGGAAAGGTTCAGGTAGTGGCTTCGCCTTTGATACGCCTTACAAACAAACCGAATGCAACAATTGAGGACATTGGTAGCCCAGAAAAACTGATTGCTTCTCTTGGGCCATTTGTCACTGGAAATACACTGGATCCAGAAGAACTCCTTGAGACTTCAGTTGAAAAGCTTGGTGATCAGACGTACTACAAATATGTGCTTGAAACTCCATATGCTCTCACTGGCACACACAATCTTGCAAAAGCAACAGCAAAGGGAAACACTGTCGTTCTGTTTGTGGTTAGTGCCAGTGACAAGCAGTGGCAAACTTCTGAGGAGACTCTAAAGGCCGTGCTTGATTCCTTCCAAGTTTAG 729 0.4719 VSTFHAFRASTSEYVSSQHTPRREFLKGLALMPLLPLVLREPPPSHAREVEVGSFLPPSPSDPSFVLFTASPKDTPALRAGNVQPYKFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPFVTGNTLDPEELLETSVEKLGDQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVVSASDKQWQTSEETLKAVLDSFQV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1238 242 SUPERFAMILY Mog1p/PsbP-like 81 242 IPR016123 -
Pvu1g1238 242 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 8 242 - -
Pvu1g1238 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 64 242 - -
Pvu1g1238 242 Pfam PsbP 85 242 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Pvu1g1238 242 PANTHER - 8 242 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1238 - - gmx:100795124 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1238 1 33595361 33598464 Pvu1g1238 1 33595361 33598464 ECH