Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1224 ATGAGATTTATAAAAATGGCTGTGACTATTGACAGACATCAGGGGTTTGGGCCCTTTAGCCGATCCCAGAGATGCAAACTCCAATCCTATGGTCACCTTGATCCGAACGTTCTTGAACTTAGCCAAACTGGTGGTACTCTTTCACACTCCTTTGAACTAGCATTTCAAGCCGATAATATTCACCGCAGTTTCTCCACTCCATGCCTCCCCCTAACCACACTGCTAGGGGAAGAGCTCACTTATTACCCTCCAAGGATTGAGATTGTTCGTGGAAGTGGAGCTCCAGTACATGCTCTAGTTGTTGAGGTTGCCATAGCTTTGGCCTCAGGTGTCCAACCAGTACCCATCCCAAGTGGCCTAGGAGGTGCCTATTCTTTCCGCAACCAAAATGGCATCAATATTGCTGTAGCAAAGCCAGTAGATGAAGAACCTTTCGCCTTGAACAACCCAAAAGGGTTAGGGGGTCAAATGCTGGGCCAACCTGGCCTAAAGAAATCGATTCGCATTGGTGAAACTGCAGCAGCAGCATCAACTGTTCCTTCTCACATGCCTAAAGTTGCCTCTCTCCAACGCTTTGTTGGTCATGGTTTTGATGCAGGAGAGTTGGGTCCTTCTTTCTTCTCAGTTGCTTCAGTCCACCACATTGGGATCCTTGACATTAGGATCATGAACCTTGATAGACATGCAGGGAATATGCTTGTGATGAAGCATGACCGTAATGATGCTAGTTATGGTGGTATGGTTGCTGAACTTGTTCCCATTGACCATGGCTTTTGCCTCCCTGAGTGGCTGGATGATCCATATTTTGAGTGGCTGCATTGGCCACAAGCCTCTATTCCTTTCTCTGACTATGAACTTGAGTATATTTCAAAACTTGATCCTTTTAAAGATGCAGAGGTTTTAAGAGCTGACATTCCTTTACTGAGGGAGTCCGCAATACGTGTTCTTATTGTTTGCACCATTTTGTTGAAGCAAGCTGCTGCTGCTGGCCTTTGCCTTGCTGAAATAGGCCAAATGATGACTAGGAAATTTAGTGGTGGTCAAGAGTTACCAAGTGAAATGGAAAACATCTGCTTAAAAGTCAAGTGTTGCATCCCTCGTGATTCCCACAGCGAAAACTGCAAAGAAAAAACTGAAGGAGGGTCAAAATGTGAAGATGGTGACATTTCCTTCGGTGACCTGAACCAAGGCGAATGGGAAGCGTTTTTGGAGGTTTATGGTGAGCTTTTGCGTAGTGTTTTTGAAGACAAGAAGTGCAAAAGCAAAAGTTGGAACATCATGGAAGTTACAGAACTTTAG 1299 0.4503 MRFIKMAVTIDRHQGFGPFSRSQRCKLQSYGHLDPNVLELSQTGGTLSHSFELAFQADNIHRSFSTPCLPLTTLLGEELTYYPPRIEIVRGSGAPVHALVVEVAIALASGVQPVPIPSGLGGAYSFRNQNGINIAVAKPVDEEPFALNNPKGLGGQMLGQPGLKKSIRIGETAAAASTVPSHMPKVASLQRFVGHGFDAGELGPSFFSVASVHHIGILDIRIMNLDRHAGNMLVMKHDRNDASYGGMVAELVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSDYELEYISKLDPFKDAEVLRADIPLLRESAIRVLIVCTILLKQAAAAGLCLAEIGQMMTRKFSGGQELPSEMENICLKVKCCIPRDSHSENCKEKTEGGSKCEDGDISFGDLNQGEWEAFLEVYGELLRSVFEDKKCKSKSWNIMEVTEL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1224 432 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 384 423 IPR044571 -
Pvu1g1224 432 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 173 IPR044571 -
Pvu1g1224 432 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 182 371 IPR044571 -
Pvu1g1224 432 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 384 423 - -
Pvu1g1224 432 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 6 173 - -
Pvu1g1224 432 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 182 371 - -
Pvu1g1224 432 Pfam Phosphatidylinositol 3- and 4-kinase 176 336 IPR000403 -
Pvu1g1224 432 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1 373 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1224 Pvu-Chr1 32974929 32977897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1224 6 365 Acyl Lipid Metabolism Gene Families AT2G40850 55.276 5.60e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1224 - - gmx:100809677 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1224 1 32974929 32977897 Pvu1g1224 1 32974929 32977897 ECH