Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1219 ATGGCGTCTCCAAACACAAACCAGGAGAAAGCAGGGGTGGTTGGTCGAATATTGATCATGCCAAAAGTTCTTAAGGAGAAGGTGTTGGGAATTTGTAGGTTAACCAAAGAGATAGCCCAAGATGATCCTAGAAAAGTTATTCATTCTCTAAAAGTGGGGCTTGCAATCTCACTGGTTTCTCTTTTCTATTACTATCAACCACTCTATGAGAACTTTGGTCTATCAGCAATGTGGGTAGTGATGCTGTAG 249 0.4137 MASPNTNQEKAGVVGRILIMPKVLKEKVLGICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWVVML* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1219 82 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 8 81 - -
Pvu1g1219 82 Pfam Aluminium activated malate transporter 37 81 IPR020966 GO:0015743
Pvu1g1219 82 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 8 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1219 Pvu-Chr1 32896597 32897082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1219 26 81 Miscellaneous Gene Families AT1G08440 60.714 4.12e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1219 - - pvu:PHAVU_001G117300g 164.466