Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1217 ATGACAGCTCAGACTCAAGAGGATCTTCTTGCGGCTCACCTCGAACAGGAAAAGATCCATGATGACGAGCCTGTAGTTGAGGATGAGGATGAGGAAGATGATGATGAAGACGATGAGGATGATGACAATGCTGAAGGTCTAGAGGGTGATACATCTGGTAGATCCAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAGCCTATTACAGGTGTCAGTCGTGTGACTGTCAAGAAGAGCAAGAACATCCTTTTTGTTATCTCAAAACCGGATGTTTTCAAGAGTCCAACTTCTGACACATACATTATATTCGGGGAAGCAAAGATTGAGGACTTGAGTTCACAGCTACAGACTCAGGCAGCAGAACAATTCAAGACTCCTAATGTGAGCAATGTCGGATTGAAGCCTGAAACCTCTGCTACTGCTCAAGATGATGAAGATGTGGACGAGTCTGATGTAGATCCCAAGGATATAGAGTTGGTGATGACTCAAGCTGGTGTGGTAAGATCAAGAGCTGTTAAGGCCCTCAAAACTGCCAATGGCGATATTGTTGCTGCCATTATGGAGCTAACTAATTGA 600 0.445 MTAQTQEDLLAAHLEQEKIHDDEPVVEDEDEEDDDEDDEDDDNAEGLEGDTSGRSKQTRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKTPNVSNVGLKPETSATAQDDEDVDESDVDPKDIELVMTQAGVVRSRAVKALKTANGDIVAAIMELTN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1217 199 MobiDBLite consensus disorder prediction 134 161 - -
Pvu1g1217 199 CDD UBA_NAC_euk 162 198 - -
Pvu1g1217 199 ProSiteProfiles NAC A/B domain profile. 58 123 IPR002715 -
Pvu1g1217 199 Pfam HYPK UBA domain 160 198 IPR044034 -
Pvu1g1217 199 MobiDBLite consensus disorder prediction 1 69 - -
Pvu1g1217 199 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 199 - -
Pvu1g1217 199 MobiDBLite consensus disorder prediction 47 68 - -
Pvu1g1217 199 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 199 IPR016641 GO:0005854
Pvu1g1217 199 MobiDBLite consensus disorder prediction 22 46 - -
Pvu1g1217 199 Pfam NAC domain 61 116 IPR002715 -
Pvu1g1217 199 SMART NAC_2 61 117 IPR002715 -
Pvu1g1217 199 Gene3D - 159 197 - -
Pvu1g1217 199 Gene3D - 67 120 IPR038187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1217 Pvu-Chr1 32855972 32859181 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1217 K03626 - gmx:100791446 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1217 1 32855972 32859181 Pvu1g1217 1 32855972 32859181 ECH