Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1213 ATGTCGGCGACGAGGACGTGGGTTCTCATTAATAACTTTCCCAGACACAGGTTCCTCTCACCCTTTACCCTCTTCATCCAACGCCGATGGAAGAAACCCACCGTTTCCGCCCGAACCCGTTTGGAGGACAGAGTACGAGACCCCCACTTCGACAAACTCATGAATCAACTCAAAAGACTCTACCTTGTCCTCAAAATCCACCACCTCATGTCCACCCGCAAGCGCGCTCCCTTCGTCTCCCTCACCCTCATGTCCCGCTGGCGAAACATCCTCGGACTCAATGTCCCTGTGGGCCCCTTCCTCCACAAATACCCTCACGTGTTCCACGTCTTTGTCCACCCTCTCAGGAGGAACACGTGCTGCAGGGTCACAAAAAAGATGAAAGAGTTGATCTTGCTAGAAAGGGTGGTGGTGAAGCAGCAGGAGATGGAGGCTGTGAAGAGGGTGAAGAAGTTATTGATGATGTCTGTGAGTGGCACTCTTCGTTTGCACGCTTTGAGGATGATCAGGAGGGAACTGGGTCTCCCTGAGGATTTCAGAGAGTCCATTCTTGGGAAATTCAGTGGGGATTTTAAATTGATTGGTTTGGAGGTTGTGGAATTGGTTGATTGCGATGCGGAATTGGGATTGGCTGAGGTTGAGAAATGGAGGGAGAGAGAGTACATAGAGAAGTGGTTGAGTGAGTTTGAGACCCAGTTTGCATTTCCCATTAGTTTCCCAACTGGGTTTAAGATTGAGAGAGGGTTTAGAGAGAGGTTGAAGAATTGGCAGAGGCTTTCATACACTAAGCCTTTTGAGCGGAAGGAGGTTGTTAGGGTGCGGACATGTGGAGGGATTGAGCGGTATGAGAAGAGGGCTGTGGCTGTTCTTCATGAGCTATTGAGCTTGACTGTGGAGAAAATGGTTGAGGTTGATCAACTGGTTCATTTTCGGAGAGACTTGGGTATCGAAGTTAATCTGCGTGAATTGCTGCTAAGGCACCCTGGTATATTTTACATATCAACTAAAGGGAAGACTCTAACTGTTTTTCTTAGGGAAGCATATGTTAAAGGGGGTTTGATTGAACCGAATCCCGTGTATGAGGCACGTAGGAATATATTGGATCTTGTATTGTTAGGGTGTAGGAAAACTAGACAATTGTTGGCTGGTGATGAGGCTAAGGAAGAGAGTAATGTTGTGGTCTGTGAAATGAATGAGGAAGGTGAAAAACAAGGGGATTGGGTGGTTCCTTTCTTGGAGAATTTTGAGGAGAGTAGATCCCCTTGA 1266 0.4755 MSATRTWVLINNFPRHRFLSPFTLFIQRRWKKPTVSARTRLEDRVRDPHFDKLMNQLKRLYLVLKIHHLMSTRKRAPFVSLTLMSRWRNILGLNVPVGPFLHKYPHVFHVFVHPLRRNTCCRVTKKMKELILLERVVVKQQEMEAVKRVKKLLMMSVSGTLRLHALRMIRRELGLPEDFRESILGKFSGDFKLIGLEVVELVDCDAELGLAEVEKWREREYIEKWLSEFETQFAFPISFPTGFKIERGFRERLKNWQRLSYTKPFERKEVVRVRTCGGIERYEKRAVAVLHELLSLTVEKMVEVDQLVHFRRDLGIEVNLRELLLRHPGIFYISTKGKTLTVFLREAYVKGGLIEPNPVYEARRNILDLVLLGCRKTRQLLAGDEAKEESNVVVCEMNEEGEKQGDWVVPFLENFEESRSP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1213 421 Pfam Plant organelle RNA recognition domain 45 374 IPR021099 GO:0003723
Pvu1g1213 421 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 18 418 - -
Pvu1g1213 421 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 18 418 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1213 Pvu-Chr1 32713855 32715801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1213 - - vun:114194999 753.436