Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1212 ATGGCTTCCTTTCCTCCTCCTGGTTCACTCACTCTGTGCGAACTCAATCGTGACCTAATCACCGTGGACGCTCTCTCCGAAGATCGAGCAAACCAAACCTATGGAAAAATCCTTGGATCGGTGTTCAGTCCAGTTCCCTTTCACTCTCTGGAGAGCGACGCTTCCGATCAGGAAGGAGCAACGGCGACGGAGAACACCGCTGGAGAAAGCGTTCAGAGGAAAGGTCCGGTGGCACTCTTGCAAGGGCTTGTGAACACCTATCTCGGACACCTCTTTTACCCTAACGTTGTGCATTTGTTGCCGGAGGTTGATCTCCAAGGAGTAAGCTGGCACCCTAATAAGCATATCATTGCTTTTATTTCTGCCCCAACACAAGTTTTGGTTCGTGATTACCAACAGTCTGAGGGGAATCCGAGTATTTTGGCGAATGAGTCACAGAGAGACGTTAGGGTGCTGGAGTGGAGGCCCAATGGTGGGAAAATGCTTGCTGTGGGTTGCAAGGGTGGAATTTGCATCTGGGCTGCTTCTTATCCTGGAAATGCTGCATCTCTTAGATCTGGTGCTGCTTCCTTTTTAGGAAGTTTGTCTAGAAACTCAGGAAATCGGTATGTCCTTGTTGACTTTCTTCGAAGTCCATACCATGAGCATAAGATATCATCTGGTTCATATGAAAGCTCCTCATTCACAGTGTGGGATTTTGCTCAAGGTGTGGGGACACCAATTCGACGTGGATTGGGAGGCATATCAATGCTGAAGTGGTCACCTACTGGAGATTACTTCTTTGTTTCAAAATTTGATGGAACATTTTATCTTTGGGAGACAAACACATGGACATCAGAACAATGGTCATCAACAAGTGGTTTTGTCAAGGGTGCAACATGGGATCCAGATGGGTGTATGATACTTCTTGCATTTTCTCAATCGTCAACTTTGGGATCTGTTCACTTTACATCAAAGCCTCCCTCGTTAGATGCTCAGCTTTTACCTGTTAATTTGCCGGAAATATTATCATTGACAGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGACATGTACAGGGGACTGATCGCCATATATGATACAAGAAGGACACGTATTATGTCTACATCTTTAATTGGATTTATTAGAGGGCCTGGAGACAGTCCGAAGCCAATCACGTTTTCATTTCATGGAAAGTTTAAGCAGGGACCATTGCTTTCTGTGTGCTGGAGCAGTGGGTTTTGTTGCACTTACCCCCTCTTGTTTCGTTCCCATATGCTTCCATGA 1311 0.4577 MASFPPPGSLTLCELNRDLITVDALSEDRANQTYGKILGSVFSPVPFHSLESDASDQEGATATENTAGESVQRKGPVALLQGLVNTYLGHLFYPNVVHLLPEVDLQGVSWHPNKHIIAFISAPTQVLVRDYQQSEGNPSILANESQRDVRVLEWRPNGGKMLAVGCKGGICIWAASYPGNAASLRSGAASFLGSLSRNSGNRYVLVDFLRSPYHEHKISSGSYESSSFTVWDFAQGVGTPIRRGLGGISMLKWSPTGDYFFVSKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGCMILLAFSQSSTLGSVHFTSKPPSLDAQLLPVNLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDMYRGLIAIYDTRRTRIMSTSLIGFIRGPGDSPKPITFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHMLP* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1212 436 Gene3D - 102 189 IPR015943 GO:0005515
Pvu1g1212 436 Pfam Anaphase-promoting complex subunit 4 WD40 domain 108 181 IPR024977 -
Pvu1g1212 436 Gene3D - 203 425 IPR015943 GO:0005515
Pvu1g1212 436 PANTHER ALADIN/ADRACALIN/AAAS 1 435 IPR045139 -
Pvu1g1212 436 SMART WD40_4 331 375 IPR001680 GO:0005515
Pvu1g1212 436 SMART WD40_4 135 174 IPR001680 GO:0005515
Pvu1g1212 436 SMART WD40_4 234 273 IPR001680 GO:0005515
Pvu1g1212 436 SUPERFAMILY DPP6 N-terminal domain-like 106 407 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1212 K14320 - gmx:100808599 815.453