Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1209 ATGATTTTTACAAAGGCTTGTTGCAGTTTTCTTTGGACATACCTTGTTATAGGGGCATGTTTTGCTTTTCGATGTTATGCTGATGCTAACCAGACTTCAACTCTGGTTGTAGATGTTTCTGATTCTGGAAGGCAAATTCCTGACACTCTTTTCGGAATATTTTTTGAGGAGATCAATCATGCTGGTACTGGTGGATTGTGGGAAGAACTTGTGAACAACAGAGGTTTTGAAGCTGGGGGCACCCGAGTTCCATCAAGTATTGCACCCTGGACTGTAGTTGGGAAAGAACCAGCCATTTTCCTAGAAACTGAACTTAGCTCTTGCTTTGAACACAACAAGGTTGCATTGAAAATAGATGTGCAGTGTGACAAATGCCCTTCTGATGGTGTTGGTGTCTCTAACCCTGGTTTTTGGGGCATGAATATTGTGGAAGGGAAGAAATACAAAGTTGTCTTCTTTGTTAAATCAAAAGGAGCACTAGAAATGACAGTATCATTCAGAGAAACTGAAGGTGGAAGGATATTGGCTTCTAGCAATATCATTGCTTCTGCATCAGAAGTTTCAAATTGGAAAAGGATGGAGACTACATTAGAAGCCGATGCATCAAGTTCCGACTCAAGTTTGTATTTAACAACAACCAAAAAAGGGGTTATATGGTTGGACCAAGTGTCTGCTATGCCTGTGGACACATACAAGGGACATGGTTTCCGAAGTGACTTGGTTAACATGCTAATAGACTTGAAACCAGCCTTTTTAAGATTTCCAGGTGGCTGTTTTATTGAAGGGCAAAGATTAAGAAATGCATTTCGGTGGAAAAATAGTGTTGGACCCTGGGAACAGAGACCTGGCCATTTTGGTGATGTTTGGAGTTATTGGACAGACGATGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATAGGTGCAAGGCCATTGTGGGTGTTTAATAGTGGCATAAGCCATACTGAAGAAATTGATACAAAAGACATCACACCTTTTGTGCAAGAAAGCCTTGATGGTATTGAGTTTGCAAGAGGTGCAGCTAGTTCAAAATGGGGTTCCCTTAGAGCATCTATGGGGCACCCAGACCCATTTGACCTAAAATATGTTGCTGTTGGAAATGAAGATTGCCAGAAGAAAAACTACCAAGGAAACTACCTAGCTTTCTACAAGGCAATAAAAGCTGCTTATCCAGACATTCAAATAGTTTCAAACTGTGATGCTTCGTCCAAACCATTAAATCACCCAGCAGATATTTATGATTATCACACTTATCCTAAGGAATATGAAACTATGTTTAATAACGCTGATGTGTTTGATAAAACACCACGAAATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGAACAAGCTAAGCAGGGAACCCTTTTGGGAGCTGTATCAGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGTGATCATGTGATAATGGCTAGCTATGCACCACTTTTTGTGAATGCAAATGACAGGAAGTGGAACCCAGATGCAATTGTTTTTAGTTCCAATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGTTTATGTTTAGAGAGTCAAATGGAGCAACACTCCTCAAATCACAACTTCAAACACCTCACCCTAATTCAGTTGCTGCATCTGCAATTATCTGCAAAAATTCCCAAACTTACTTGAAAATAAAGGTTGCAAACGTTGGGAAGAGCCCAATAAATCTCAAGATTTCTCTGAAAGGAATTGAGAGTTCAGAAGCAACTAAGGCAACAAAGACAGTGCTCACATCTGCAGATGCATCCGATGGGAACAGCTTTGCAAACCCAACAAAGATAGTACCAAAACGAAATCCACATACGAGTGCTGGCAAAGAGATAAATGACATACTTCCTCCAGTTTCATTTACAGTATTTGATTTATTGATTAGAAGACCATAA 1947 0.4011 MIFTKACCSFLWTYLVIGACFAFRCYADANQTSTLVVDVSDSGRQIPDTLFGIFFEEINHAGTGGLWEELVNNRGFEAGGTRVPSSIAPWTVVGKEPAIFLETELSSCFEHNKVALKIDVQCDKCPSDGVGVSNPGFWGMNIVEGKKYKVVFFVKSKGALEMTVSFRETEGGRILASSNIIASASEVSNWKRMETTLEADASSSDSSLYLTTTKKGVIWLDQVSAMPVDTYKGHGFRSDLVNMLIDLKPAFLRFPGGCFIEGQRLRNAFRWKNSVGPWEQRPGHFGDVWSYWTDDGFGYFEGLQLAEDIGARPLWVFNSGISHTEEIDTKDITPFVQESLDGIEFARGAASSKWGSLRASMGHPDPFDLKYVAVGNEDCQKKNYQGNYLAFYKAIKAAYPDIQIVSNCDASSKPLNHPADIYDYHTYPKEYETMFNNADVFDKTPRNGPKAFVSEYALIGEQAKQGTLLGAVSEAGFLIGLERNSDHVIMASYAPLFVNANDRKWNPDAIVFSSNQVYGTPSYWVQFMFRESNGATLLKSQLQTPHPNSVAASAIICKNSQTYLKIKVANVGKSPINLKISLKGIESSEATKATKTVLTSADASDGNSFANPTKIVPKRNPHTSAGKEINDILPPVSFTVFDLLIRRP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1209 648 SUPERFAMILY Glycosyl hydrolase domain 520 642 - -
Pvu1g1209 648 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 645 - -
Pvu1g1209 648 SUPERFAMILY (Trans)glycosidases 205 537 IPR017853 -
Pvu1g1209 648 SMART alpha_l_af_c 454 637 IPR010720 GO:0046373|GO:0046556
Pvu1g1209 648 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 645 - -
Pvu1g1209 648 Gene3D - 530 643 IPR013780 -
Pvu1g1209 648 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pvu1g1209 648 Gene3D Glycosidases 221 529 - -
Pvu1g1209 648 Pfam Alpha-L-arabinofuranosidase C-terminal domain 455 637 IPR010720 GO:0046373|GO:0046556
Pvu1g1209 648 Gene3D - 67 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1209 Pvu-Chr1 32690700 32695983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1209 15 648 Glycoside Hydrolase AT3G10740 58.833 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1209 K01209 - gmx:100780771 1063.52