Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1208 ATGGGGTTTTGTTCTCTCAAGCCTTGGTTTGGTGTTATGCTCTTTTCCCTCCTGATTCATTTTCTTACGTTTCAATATTGCTGTGCTGATGCAAACTCAACACTGGTTGTAAATGCTTCCTTTGATGAGGTGAATGCAAGGCGAATTCCTCACAGTTTTCTTGGAGTGTTCTTTGAGGAGATAAATCATGCTGGTGCTGGGGGACTGTGGGCAGAACTTGTAAGCAATAGAGGCTTTGAAGCTGGAGGACCAGACAACACCTTAAATATTTATCCTTGGTCAGTTATTGGAAATGAGTCATTCATTTCTGTATCAATAAACCATACCTCTTGCTTTGAGCGTAACAAAGCTGCATTACTAATGAAAGTGTATTGTGGTGGTCACAAACCTTGCCCATATGGTGGAGTTGGTATTTCTAATCCTGGTTATTGGGGCATGAATTTTGAGCAAGGAAAGAGGTACAAGGTGGTCTACCATGTTAAATCAGAAACAAAGTTTGATTTTCAACTCTCATTCAAGGGTGTTGATGTTATAAAAGTGGCATCAAAAACCAGGCATGTGTTTGGAGATAGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAGATACTAATCACTATTCAAGTCTTCAAATAACCACAACCAGTGAAGGGAGATTCTTGTTAGACCAGGTGTCAGCTATGCCATTGGACACTCATATGGGCCATGGCTTCAGAAAGGACCTTTTTCAAATGGTGGCAGATTTGAAACCTAAATTTCTTAGATTTCCTGGTGGTACTTATGTTGAAGGTGATCATCTGCAAAACAGATATCAGTGGAAAGATACAATTGGACCATGGGAAGAGAGACCTGCACATTTCAATGATATTTGGAACTATTGGAGTGACGATGGAATTGGTTATTTTGAATATCTCCAACTAGCAGAGGACCTTGGTGCATTGCCCATATGGGTTTTTAACGCTGGTATCAGCGTTCATGAAGAAATTAATGCATCAGCCTTAGCTCCTTATGTGCAAGATGCCCTGGATGGCATTGAATTTGCAAGAGGCTCTCCTAAATCAAAATGGGGTTCTGTTAGAGCTGCAATGGGACATCCTAAACCATTTGACTTGAGATATGTTGCTGTTGGAAATGAAGATTGTTGGCATTTTAATTATCAAGGAAATTACCTTAAGTTTTATGAGGCTATAAGATCTGCCACCCCAGATATTCAAATTATCTCAAACTGTGATGCTTCTAGTGCACCATTAAAGCATCCAGCTGATTTATATGATTTTCATATTTATACAGACTCCAATGACATGTTTTCTAAGTCCACTCGGTTCGGTAACACATCACGAGCTGGTCCAAAGGCTTTTGTGAGTGAGTATGCTGTGTGGAAAGAAGATGCTGCAAATGGAAGTCTTTTGGCTGCTATAGCTGAAGCCGCATTTCTTATTGGACTAGAGAAGAACAGTGATATTGTTCAGATGGTTTCTTATGCGCCACTTTTCTCGAACATGAATGACAGGAGATGGATTCCCGATGCAATTGTGTTTGACTCTTATCAGCTCTATGGAACTCCCAGCTATTGGGTGCAGAAACTTTTTATTGAGTCCACTGGAGCAACATTTCTTGACTCAACACTCACAACTTCATCTAAAAAACTTATTGCATCTGCAATTATCTGGGAAAACTCTACAGAGAAGAAAAAATACCTAAGAGTAAAGGTAGTAAACTTTGGTATAGCCACAGAGAGCCTTAACATTTATATAATTGGGTTGAACTCAAATGTGCAACAATTTGGTTCTACAAAGACAGTTCTTACATCAACCAACTTAATGGATGAGAATTCCTTCTTGGAGCCCAAGAAGGTGGTGCCACAAACAAGTTCCCTAGAGAATGCTGGCAAGTACATGAATGTTGTACTCTCTTCCTATTCAGTAACATCATTAGATTTTTTAATATGA 1953 0.3948 MGFCSLKPWFGVMLFSLLIHFLTFQYCCADANSTLVVNASFDEVNARRIPHSFLGVFFEEINHAGAGGLWAELVSNRGFEAGGPDNTLNIYPWSVIGNESFISVSINHTSCFERNKAALLMKVYCGGHKPCPYGGVGISNPGYWGMNFEQGKRYKVVYHVKSETKFDFQLSFKGVDVIKVASKTRHVFGDRKWKRVETIVEAKDTNHYSSLQITTTSEGRFLLDQVSAMPLDTHMGHGFRKDLFQMVADLKPKFLRFPGGTYVEGDHLQNRYQWKDTIGPWEERPAHFNDIWNYWSDDGIGYFEYLQLAEDLGALPIWVFNAGISVHEEINASALAPYVQDALDGIEFARGSPKSKWGSVRAAMGHPKPFDLRYVAVGNEDCWHFNYQGNYLKFYEAIRSATPDIQIISNCDASSAPLKHPADLYDFHIYTDSNDMFSKSTRFGNTSRAGPKAFVSEYAVWKEDAANGSLLAAIAEAAFLIGLEKNSDIVQMVSYAPLFSNMNDRRWIPDAIVFDSYQLYGTPSYWVQKLFIESTGATFLDSTLTTSSKKLIASAIIWENSTEKKKYLRVKVVNFGIATESLNIYIIGLNSNVQQFGSTKTVLTSTNLMDENSFLEPKKVVPQTSSLENAGKYMNVVLSSYSVTSLDFLI* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1208 650 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 13 650 - -
Pvu1g1208 650 Gene3D Glycosidases 226 532 - -
Pvu1g1208 650 SUPERFAMILY (Trans)glycosidases 211 539 IPR017853 -
Pvu1g1208 650 SMART alpha_l_af_c 456 642 IPR010720 GO:0046373|GO:0046556
Pvu1g1208 650 Gene3D - 533 648 IPR013780 -
Pvu1g1208 650 Pfam Alpha-L-arabinofuranosidase C-terminal domain 457 642 IPR010720 GO:0046373|GO:0046556
Pvu1g1208 650 Gene3D - 70 225 - -
Pvu1g1208 650 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 13 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1208 Pvu-Chr1 32684323 32689234 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1208 34 649 Glycoside Hydrolase AT3G10740 59.194 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1208 K01209 - gmx:100787734 1030.78