Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1207 ATGGAGGTGTATTGTAGTGATCAGAACCCTTGTCCAATTGGTGGCGTTGGTATTTCTAACCCTGGTTATTGGGGCATGAATATCGAGCAAGGGAAATTGTACAAGGTGGTGTATCATGTTAAATCAGAAGGAGAGTTTGATTTTCAACTTTCATTCACGGGTGTTGATGTTATAAACATGGTATCAAATATCACAGAAATTTCTGAAGATGGAAAATGGAAAAGGGTGGAGACGGTGGTGGAAGCAAACGCTACCAATCACTATTCAAGTCTTCAAATAACCACAACCAATGAAGGAAGTTACTTGTTAGACCAAGTGTCAGTGATGCCATTGGACACTTACATGGGTCATGGCTACCGAAAGGATCTTTTTCAAATGGTGGCAGATTTGAAACCAAAATTTGTCAGATTTCCTGGTGGAACGTATGTTGAAGGAGACTATCTCAAGAATCACTATATGTGGAAAGATACAATTGGACCATGGGAAGAGAGACCAGGACACTACAATGATATTTGGAACTATTGGAGTGATGATGGAATTGGTTATTTAGAGTATCTCCAACTAGTAGAGGACCTTGGTGCATTGCCCATATGGGTGTTCAACGCTGGCTTCAGCCGTCATGAAGAAATTAATACAAAAAATTTAGCACCTTATGTGCAAGATGCCCTTGATGGCATTGAATTTGCAAGAGGATCTCCTGAATCAAAATGGGGTTCTGTTAGAGCTAGATTGGGACATCCAAAACCATTTGATTTGAGATATGTTGCCATTGGAAATGAAGATTGTGAGTTTTCGAATTATCAAGGAAATTACCTTAAGTTCTATGATGCTATAAAAATTGCCTACCCAGATATGAAAATGATCTCAAATTGTGATGCTTCTAGCACAAAATTAAACCATCCAGCTGATTTGTTCGATTTTCATATTTATACAAACTCGACGGACTTATTTTCTAAGTCTACTCAATTCGATCACACGTCACGATCTGGACCAAAGGCTTTCGTGAGTGAGTATGCTGTATGGAGACAAGATGCTGGAAATGGAAGTCTTCTGGCTGCTTTGGCAGAAGCTGCATTTCTTATTGGCCTAGAAAAGAACAGTGATGTTGTCGACATGGTTTCTTATGCACCACTTTTCTCAAATATAAACGACAGGAAATGGATCCCCGATGCAATTGTGTTCGACTCTTATCAGCTCTATGGAACACCTAGCTATTGGGTGCAAAAGCTTTTTATTGAGTCTAGTGGAGCAAAACTTATGCACTCAAAACTCAAAACAGCTTCATCTAATAAACTTATTGCATCTGCAATTAGTTGGCAAAATTCTCCATATGAGAAAAAATACATAAGAATAAAGGTAGTGAACTTCGGAGCAGCCACAGAGACACTTTACATACGCACGCGTGGGTTCTCAAAAATGCAACTATTTCGTTCTGTAAAGACAGTGATTACATCAACCAACGTAATGGATGAGAATTCTTTCTCACAGCCTACCAAGGTGGTGCCACAAACAAGTTCCGCAGTGAATGTTAAAAGGAAGATACGTGCAATTGTTTCTCCCTATTCAGTCACATCATTTGATTTGTTAGTTTATTAG 1596 0.3904 MEVYCSDQNPCPIGGVGISNPGYWGMNIEQGKLYKVVYHVKSEGEFDFQLSFTGVDVINMVSNITEISEDGKWKRVETVVEANATNHYSSLQITTTNEGSYLLDQVSVMPLDTYMGHGYRKDLFQMVADLKPKFVRFPGGTYVEGDYLKNHYMWKDTIGPWEERPGHYNDIWNYWSDDGIGYLEYLQLVEDLGALPIWVFNAGFSRHEEINTKNLAPYVQDALDGIEFARGSPESKWGSVRARLGHPKPFDLRYVAIGNEDCEFSNYQGNYLKFYDAIKIAYPDMKMISNCDASSTKLNHPADLFDFHIYTNSTDLFSKSTQFDHTSRSGPKAFVSEYAVWRQDAGNGSLLAALAEAAFLIGLEKNSDVVDMVSYAPLFSNINDRKWIPDAIVFDSYQLYGTPSYWVQKLFIESSGAKLMHSKLKTASSNKLIASAISWQNSPYEKKYIRIKVVNFGAATETLYIRTRGFSKMQLFRSVKTVITSTNVMDENSFSQPTKVVPQTSSAVNVKRKIRAIVSPYSVTSFDLLVY* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1207 531 SUPERFAMILY (Trans)glycosidases 91 419 IPR017853 -
Pvu1g1207 531 Pfam Alpha-L-arabinofuranosidase C-terminal domain 337 522 IPR010720 GO:0046373|GO:0046556
Pvu1g1207 531 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 530 - -
Pvu1g1207 531 Gene3D - 413 529 IPR013780 -
Pvu1g1207 531 SMART alpha_l_af_c 336 522 IPR010720 GO:0046373|GO:0046556
Pvu1g1207 531 Gene3D Glycosidases 106 412 - -
Pvu1g1207 531 Gene3D - 16 105 - -
Pvu1g1207 531 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1207 Pvu-Chr1 32633934 32637557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1207 1 529 Glycoside Hydrolase AT3G10740 59.363 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1207 K01209 - gmx:100787734 787.719