Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1201 ATGGGTTCATTCAAGGCCATATGCAGTGTTTCTCTGCTCCAATTGTTCATAGTGTTTTGCCTTGTCTTCCAATGCTTTGCTACTAGAAGACACACTGACCCGAGAACAACTCTAGTAGTAGATGCTTCTAATGCAATTGGAAGGCCAATACCAGAGACACTTTTTGGCATCTTCTTTGAGGAGATCAATCATGCTGGAGCTGGGGGATTATGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGGGGCCCTAACACTCCTTCAAATATTGATCCTTGGACAATTATTGGAAATGAATCATCAATAATTGTTGAAACTGATCGTACCTCTTGCTTTGACCGTAATAAGGTTGCACTTCGATTGGAGGTGTTATGTGACAGTGAAGGTGATAACATCTGCCCAGCTGAAGGTGTTGGTGTTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGAAGTACAAAGTGATCTTCTATGTTCGTTCAACCGAATCACTTAATCTAACAGTTTCATTGATTGGACAAAGTAGTGTAGGGAACCTGGCTTCATCCACAATCACCGGTAATGCTGCTGATTTTTCAAACTGGACAAAGAAGGAGACTTTATTGGTTGCCAAGGCAACGGATCATAACTCAAGACTTCAATTCACGACCACCACCAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCACTGGACACATATAAGGGACATGGTTTCCGAACTGAACTTTTTGAAATGCTGTCAGATTTGAAACCCAAATTTATCAGATTTCCAGGTGGCTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCATTTCGATGGAAGGCAACTGTTGGACCATGGGAGGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTACTGGACTGATGATGGACTTGGCTACTTTGAGTTTCTCCAACTTGCAGAGGACTTGGGGGCTTTACCAATATGGGTATTTAATAATGGTGTCAGCCATAATGATGAAGTTGATACATCTGTGGTCTTACCTCTTGTGCAAGAAGCCCTTGATGGAATTGAGTTCGCAAGAGGTGATCCCACTTCAAAATGGGGTTCTCTTAGAGCTGCTATGGGACACCCTGAGCCATTTGATCTAAGATATGTTGCTGTTGGGAATGAAGATTGTGGAAAACCGAAATATCAAGGAAACTACCTGAAATTCTATCATGCAATAAGAAGTGCTTATCCAGATATCCAAATTATCTCAAACTGTGATGGTTCTTCTCGACCTTTAGATCATCCAGCTGATATGTACGATTATCATGTTTATACAAATGCGAATGACATGTTTTCTAGAGCTAATGCATTTGATCGCACATCACGAAATGGTCCAAAGGCTTTTGTAAGTGAGTATGCTGTGACTGGAAAAGATGCTGGGACAGGAAGCCTTTTGGCAGCTCTGGCTGAAGCTGGGTTCCTTATTGGACTCGAAAAGAACAGTGATGTTATTGAAATGGTCAGCTATGCTCCACTTTTTGTAAATGCCAATGACAGGAGGTGGAACCCAGATGCAATTGTATTCAACTCCTTTCAGGCCTATGGAACTCCTAGCTATTGGGTGCAATTATTTTTCTCAGAGTCAAGTGGAGCAACACTTCTAAATACATCACTTCAATCTAATTCCTCCAATTCAGTCATTGCATCAGCAATAACATTTCAAAGTTCTGTAGATAAGAAAAATTACATACGAATAAAGGTTGTGAATTTTGGCACCAGTGCGGTGAACCTCAAAATCTCTCTTGAAGGACTAGAACCAGATTCATTGCAGTTATCTGGGTCAACAAGAACTGTGCTCACATCTGGAAATGTAATGGATGAGAACTCCTTCTCACAGCCCAGGAAGGTGGCGCCAATTCAGAGTAGACTCCAGAATGTTGGGAAGGACCTGAATGTCACAATCCCTCCACGTTCGTTCACATCATTTGATTTGCTGAAAGAATCCAGTAATCTGAGGATGAATGGGAGCAATTCTTCTTGTACGAGGTCTTCTATTTAA 2034 0.4194 MGSFKAICSVSLLQLFIVFCLVFQCFATRRHTDPRTTLVVDASNAIGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWTIIGNESSIIVETDRTSCFDRNKVALRLEVLCDSEGDNICPAEGVGVYNPGFWGMNIEQGKKYKVIFYVRSTESLNLTVSLIGQSSVGNLASSTITGNAADFSNWTKKETLLVAKATDHNSRLQFTTTTKGVIWLDQVSAMPLDTYKGHGFRTELFEMLSDLKPKFIRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGVSHNDEVDTSVVLPLVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKPKYQGNYLKFYHAIRSAYPDIQIISNCDGSSRPLDHPADMYDYHVYTNANDMFSRANAFDRTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVIEMVSYAPLFVNANDRRWNPDAIVFNSFQAYGTPSYWVQLFFSESSGATLLNTSLQSNSSNSVIASAITFQSSVDKKNYIRIKVVNFGTSAVNLKISLEGLEPDSLQLSGSTRTVLTSGNVMDENSFSQPRKVAPIQSRLQNVGKDLNVTIPPRSFTSFDLLKESSNLRMNGSNSSCTRSSI* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1201 677 SUPERFAMILY (Trans)glycosidases 214 545 IPR017853 -
Pvu1g1201 677 SMART alpha_l_af_c 462 650 IPR010720 GO:0046373|GO:0046556
Pvu1g1201 677 SUPERFAMILY Glycosyl hydrolase domain 528 654 - -
Pvu1g1201 677 Gene3D Glycosidases 218 537 - -
Pvu1g1201 677 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 669 - -
Pvu1g1201 677 Pfam Alpha-L-arabinofuranosidase C-terminal domain 463 650 IPR010720 GO:0046373|GO:0046556
Pvu1g1201 677 SUPERFAMILY Galactose-binding domain-like 73 233 IPR008979 -
Pvu1g1201 677 Gene3D - 538 657 IPR013780 -
Pvu1g1201 677 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 1 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1201 Pvu-Chr1 32562240 32570947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1201 1 676 Glycoside Hydrolase AT3G10740 68.041 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1201 K01209 - gmx:100806458 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1201 1 32562240 32570947 Pvu1g1201 1 32562240 32570947 ECH