Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1200 ATGTATCTACACCGCCACATCCTCACTAGACTCTCCCCGCACCGCCGCCACTTCTCCCAATCCGCGGCCGCTGCCATCCTTCACCCGCCGGAGCCGGAGCCGGAGCCGCTCACGTATCTCGACGGCTTTCCTCGCCCGGATCCCAAGCACGATGAGACGATCCTCGCTGTTCCCCGCGCGGACTCTGGCAAGAACATTTCCGCCAAGGAGCGACGCGTCGGGCGCGTGCCGAGCATCATCTTCGAGCAAGAGGACGGCCAGCACGGCGGTAACAAACGCCTCATCTCCGTTCGCACTGACCAGATCAGAAAACTCGTCAACCACCTCGGCCGGTCCTTCTTCCTCTCCCGCCTCTTTCACCTCGAAGTCCGCACACAGTTAGATTCTGATGACGTCGTTGAGAGCGTTCGCGTCTTGCCTCGCAGTATTCATTTGAAAGCTGGCACAGATAGCCCGTTGAATGTGACCTTTATAAGGGCTCCGTCGCACGCCTTGTTGAAAGTTGATGTTCCTCTTGTCTTCAGAGGAGACGATATATCGCCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTTAAGTTCTTGTGCCCTGCCGACATTATTCCCCCATATATTGACGTGGATTTAAGTGAGTTGGATGTGGGTCAGAAGGTGGTAATTGGCGATCTCAAAGTTCACCCTGCTTTAAAGTTTCTTCAGTCAGAAGAGGAAGCTGTTTGTAAAATTATGGGCCAAAGAGTTTCTGAAATACAAAAGAAATCTAAGTAA 780 0.5269 MYLHRHILTRLSPHRRHFSQSAAAAILHPPEPEPEPLTYLDGFPRPDPKHDETILAVPRADSGKNISAKERRVGRVPSIIFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLEVRTQLDSDDVVESVRVLPRSIHLKAGTDSPLNVTFIRAPSHALLKVDVPLVFRGDDISPGLKKGASLNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKVVIGDLKVHPALKFLQSEEEAVCKIMGQRVSEIQKKSK* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1200 259 CDD Ribosomal_L25_TL5_CTC 53 159 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pvu1g1200 259 SUPERFAMILY Ribosomal protein L25-like 53 253 IPR011035 GO:0006412
Pvu1g1200 259 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 18 257 - -
Pvu1g1200 259 Pfam Ribosomal L25p family 56 157 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pvu1g1200 259 PANTHER BNAA01G13300D PROTEIN 18 257 - -
Pvu1g1200 259 Gene3D Ribosomal Protein L25; Chain P 53 160 IPR020056 -
Pvu1g1200 259 Gene3D Ribosomal protein L25, beta domain 164 255 IPR037121 -
Pvu1g1200 259 Pfam Ribosomal protein TL5, C-terminal domain 166 248 IPR020057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1200 Pvu-Chr1 32481211 32484232 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1200 K02897 - gmx:100809143 434.491