Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1194 ATGGCAAATAGACAGCATCCCTCAGTGTTTTTGGTGTTAGTTACTTTTTTGCTTTCTATCTATTACTCAGAGCAATTACAATCTTCTCACTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAACTTTCCTGCTGCTTTGAGCAGCTGGAGCAACGACACAGATTTTTGCAACACAGATTCAAACTCTTCCCTCTCTGTAGTGTGCTATGAAGACACCATAACACAGCTTCACATAATAGGTGAAAGAAGAGATTCACCTCTCCCTAGAAATTTCTCAATAAATTCCTTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTCTGGGTATTTGGGGTCCTTTGCCTGGTAAGATAGCTCGTTTGTCATCCCTGGAAATAGTTAACATGAGTTCCAATTTTCTCTATGGTCCCATTCCTCAGGAACTTTCTTCACTGACAAAACTCCAAACACTCATATTTGACAACAACATGCTGGCTGAAACATTTCCTCCTTGGCTTGATTCACTTCCAGCCTTAACTGTGCTAAGTTTGAAGAATAATTTGTTCAATGGATCTCTACCGAATTCTCTTGGTAATGTGGAGAATTTGAGAGCTCTTTCACTTTCTCATAATCACTTTTATGGGGTGGTACCTGACTTTAGTCGTTTGACGAATCTTCAAGTGCTTGAATTGGATGATAATGCCTTTGGACCTGAGTTTCCTCAACTTGGTAACAAGTTGGTTACACTAGTTCTAAGACACAATAGGTTCAGAGATGGTATTCCTGCTGAATTGAGCTCATACTATCAGCTTGAACGTTTGGATATATCATCAAATGCATTGGTGGGGCCATTTCAGCCAGGATTGTTGTCACTTCCTTCTATTACTTATCTGAATATTTCTGGTAACAAATTAACTGGGATGCTTTTTGAGAATCTGTCCTGCAATTCAGAGCTTGATGTGGTTGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAAATGTTTAGTGTCAAATTCCAGTGATAGGACTTTCCATTATGCTAGAAATTGTCTGGACACTGCGAATCAAAATCAGCAGCCGCAACCTTTTTGCCACACTGAGGCCTTAGCCGTGGGAATATTACCTGAGAGAAAGAAGCACAGAAAAGTATCTAAGGTAGTTCTTTCCCTAGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTGTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGCTAGAACCAAAATGAAGAATCCTCCAACAAGATTAATATCAGAAAATGCTGCTTCTGGTTACACTTCTAAGTTGCTTTCTGATGCAA 1336 0.3967 MANRQHPSVFLVLVTFLLSIYYSEQLQSSHSQTLLRIQQLLNFPAALSSWSNDTDFCNTDSNSSLSVVCYEDTITQLHIIGERRDSPLPRNFSINSFVTTLVRLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNFLYGPIPQELSSLTKLQTLIFDNNMLAETFPPWLDSLPALTVLSLKNNLFNGSLPNSLGNVENLRALSLSHNHFYGVVPDFSRLTNLQVLELDDNAFGPEFPQLGNKLVTLVLRHNRFRDGIPAELSSYYQLERLDISSNALVGPFQPGLLSLPSITYLNISGNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPKCLVSNSSDRTFHYARNCLDTANQNQQPQPFCHTEALAVGILPERKKHRKVSKVVLSLGIVGGTLGGVALVLLIFFIVRRGNARTKMKNPPTRLISENAASGYTSKLLSDA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1194 445 Gene3D Ribonuclease Inhibitor 27 242 IPR032675 -
Pvu1g1194 445 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 445 - -
Pvu1g1194 445 SUPERFAMILY L domain-like 33 353 - -
Pvu1g1194 445 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Pvu1g1194 445 Gene3D Ribonuclease Inhibitor 243 365 IPR032675 -
Pvu1g1194 445 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1194 Pvu-Chr1 32328966 32331476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1194 43 445 Miscellaneous Gene Families AT3G03770 60.494 4.45e-149 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1194 - - pvu:PHAVU_001G1151001 849.736