Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1180 ATGGATAAACAAAGCGCAGAAAAATCACGTCGGGAACGAAGGAAAGAGTCCCGCTTGGCAAAGAATGCATCAAGACACCAATCCTGGCTCCTCCACCAGAAATCTAGAGCTACGAAAAAACATGGCAGTAATTCAGAGATGGAACCTAAAAGCACACCTGACACATCTGTTAGTCCTAGTGTCAAGGAAACACAAGTAGAAAAGTTAGAGTCTTACTCTAGGAAACATGAGATAGATGAAGAAAACATAGTGTCAGAGGAAGATCAGGGTGGTTCTGTTGCAAAGAAAATGAAGAAAATGAAGAAGGGTTCTGGCAAAGGTTCCAGGAAGAGCATGTTTGAGATGGGCATGCAGGATGTTTCTATAGCTGCTGAAAAGGATCTAGAACTGGAAAGGAAACTTTCCAAGAAGCTAAAGGTGAAGGAAGGAAAATTGAGGGGAATGGATGATGGGCTTAACATATTAATTGAAGGAATGTCTTCTTCTTTTGATTTTATGGGAGAGGGGGAGGTTCCTGGTATTGATGAATTGCCTGTGAAGAGATTGAAGAAGAGCTTGTCAAGTAAGAAGGACAAGTTGTCGAGGAAAAGAATGAAAGCGGAAGCAATGGATGATGTATCAGGGCATGTAGAAACTTCTAATGAAGATGTAGAATTGGATGGTGTTCCTGGCAGTGAGCCTTCAAGGAAGAAGCATAAGAAAGGAAATTCTATTGGCATGTCCAAGCCTGTGGAATCTTGTGGAATGGAGGGGAAATTGGGCGACACTCCATCTAAAGTTCCGGAAAAGAAAGCCAAAGAAAAATATATAGCGCCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTGCGAGGTCTTCTTAACAGGCTTTCTGAATCTAATGTTGAGTCAGTTACTGGGGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCTTCACAGATCATGACTGAGGAAGTTTTGGCATCCTGTTCTGGTGGTCCCCGTGGCAATCAACAGTATGCTGCTGTTTTTGCTTCATTTGTTGCTGGGATGGCATGTTTGGTTGGTGTTGACTTTGGTGCAAAGTTTATGGCTTCCTTTGCTAAATGCTTTGAGGATGAGTACAATAAAGAAGACAATCTCTCCTTGCGGAATCTTACTCTTCTTTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTGCTTATGCTGAGCAAGCGTTTAACTGAGACAGATGTCTCAATCATTTTGGCATTGTTACAATGTTGTGGGATGAAAATAAGGGTTGATGATCCAGCTGCCATGAAAGATTTCATTCTTAGCGTTCAGAATACATCAAATAAGTTGAAGACTTCTTCTGGAGATGACAGTCAAAAGAAAAATAGCAAAAGAATGGACTTCATGCTTGAAATTATATGTGACATCAAGAATAACAAAAGAAAGCCAAATGAGGACAGTGCACATCACACTCGGATTAAGAAGTGGTTACAGAAGTTAAGGGTTGATGACATTTTGATTAGAGGGCTTAAATGGAGCAAGCTACTTGATCCTAACAAGAAGGGCCAGTGGTGGTTGTCTGGAGATGCGGCTTCTTCAACAGTTAATGTTGAAGAAGTTGCCGACAGAATAGACAAAAATGTTCTTGAAACCCAAAGAATGCTCCAGCTCGCTGCTGCTCAAAAGATGAACACAGATGCCAGAAGGGCAATCTTTTGTATAATAATGAGTGGAGAGGACTATATTGATGCATTTGAGAAGCTTCTAAGATTGGAATTACCAGGCAAGCAGGACAGAGATATCATGCGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTTCTGGCTTCCAAGTTATGCGAGCATGACAAAAATCACAAGTTCACTCTACAGTTTTGCCTGTGGGATCAGCTTAAGGAGCTGGAGTCAATGCCACTAATGAGGTCAATGCACTTAGCAAAATTTGTGGCTGAAATGGTTGCCTCTTTCACTCTTTCCCTTACTGCTTTGAAGACTGTGGATCTGAATGATATCACCTTGTTGACACCAAAAAGGATCATGCATTTCCGCATTCTGTTTGAGGCCATTTTGGAGTATCCTGAAAACTTGGTATGGAACATATTCACACGTGCAGCAGTGACCCCTGAACTTGAAAGTCTTAGGCAAGGCCTTGAGTTTTTCATTAAGGAGTACGTTGTGAAAACCAATAAAGATCTAACTCAAAAGTTCAAGTTAGCAAAAAAAGCTCTTAATAATGTGGAAGGAGTGTTGAAGTGA 2331 0.4093 MDKQSAEKSRRERRKESRLAKNASRHQSWLLHQKSRATKKHGSNSEMEPKSTPDTSVSPSVKETQVEKLESYSRKHEIDEENIVSEEDQGGSVAKKMKKMKKGSGKGSRKSMFEMGMQDVSIAAEKDLELERKLSKKLKVKEGKLRGMDDGLNILIEGMSSSFDFMGEGEVPGIDELPVKRLKKSLSSKKDKLSRKRMKAEAMDDVSGHVETSNEDVELDGVPGSEPSRKKHKKGNSIGMSKPVESCGMEGKLGDTPSKVPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESVTGELSLIFQSVARSVASQIMTEEVLASCSGGPRGNQQYAAVFASFVAGMACLVGVDFGAKFMASFAKCFEDEYNKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLLMLSKRLTETDVSIILALLQCCGMKIRVDDPAAMKDFILSVQNTSNKLKTSSGDDSQKKNSKRMDFMLEIICDIKNNKRKPNEDSAHHTRIKKWLQKLRVDDILIRGLKWSKLLDPNKKGQWWLSGDAASSTVNVEEVADRIDKNVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQLKELESMPLMRSMHLAKFVAEMVASFTLSLTALKTVDLNDITLLTPKRIMHFRILFEAILEYPENLVWNIFTRAAVTPELESLRQGLEFFIKEYVVKTNKDLTQKFKLAKKALNNVEGVLK* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1180 776 MobiDBLite consensus disorder prediction 194 233 - -
Pvu1g1180 776 SUPERFAMILY ARM repeat 282 493 IPR016024 -
Pvu1g1180 776 Pfam MIF4G domain 290 491 IPR003890 GO:0003723|GO:0005515
Pvu1g1180 776 SMART if4_15 289 491 IPR003890 GO:0003723|GO:0005515
Pvu1g1180 776 Gene3D - 257 535 - -
Pvu1g1180 776 Pfam MA3 domain 579 680 IPR003891 -
Pvu1g1180 776 Coils Coil 183 203 - -
Pvu1g1180 776 SMART ma3_7 578 684 IPR003891 -
Pvu1g1180 776 ProSiteProfiles MI domain profile. 577 693 IPR003891 -
Pvu1g1180 776 MobiDBLite consensus disorder prediction 186 260 - -
Pvu1g1180 776 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g1180 776 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 774 - -
Pvu1g1180 776 MobiDBLite consensus disorder prediction 48 66 - -
Pvu1g1180 776 MobiDBLite consensus disorder prediction 67 82 - -
Pvu1g1180 776 MobiDBLite consensus disorder prediction 1 113 - -
Pvu1g1180 776 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 774 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1180 K17583 - gmx:100778579 1264.6