Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1179 ATGGCTTCCTCTTCTTCTTCTTCAGCTCGCCTTGCCTTCTTTGCCATCTCCATGCTTCTGCTTTCATCACTTTCTATGGCTACTGATTTTGTTGTGGGTGATGACAAGGGTTGGACTCTTGATTTTAACTACACAACGTGGGCACAGGACAAGGTTTTCCATGTTGGTGACACCCTTTGGTTCAACTATGCGAAAGCGAACCACAACGTGGTGAAAGTGAACGGAACACAGTTCAAGGAGTGCAGTTTCACAGCAGAGAACGAGGTACTCTCCACCGGAAAGGACAGCATCACGCTGAAAGCCGAAGGAAGGAAGTGGTACATTTGCAGCAGAGGCAACCACTGCGCCAATCATCAAATGAAACTGCTCATCACCGTCGAAGCTGCACCTCCCGCACCCGCTCCCACTTCCTCCGCTTCTTCTCTCATGGCTTCTCTCTCTGGGGCCCTCATCGTTGCCCTCGCACCAATCCTTGTCTGA 480 0.5083 MASSSSSSARLAFFAISMLLLSSLSMATDFVVGDDKGWTLDFNYTTWAQDKVFHVGDTLWFNYAKANHNVVKVNGTQFKECSFTAENEVLSTGKDSITLKAEGRKWYICSRGNHCANHQMKLLITVEAAPPAPAPTSSASSLMASLSGALIVALAPILV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1179 159 Pfam Plastocyanin-like domain 38 117 IPR003245 GO:0009055
Pvu1g1179 159 PANTHER BLUE COPPER PROTEIN 9 156 IPR039391 GO:0009055
Pvu1g1179 159 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Pvu1g1179 159 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 9 156 - -
Pvu1g1179 159 CDD Phytocyanin 28 126 - -
Pvu1g1179 159 Gene3D - 26 130 IPR008972 -
Pvu1g1179 159 SUPERFAMILY Cupredoxins 26 126 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1179 18 159 Miscellaneous Gene Families AT5G26330 29.940 1.28e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1179 - - gmx:100780078 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1179 1 31773563 31774286 Pvu1g1179 1 31773563 31774286 ECH