Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1178 ATGGAAATTCCCAAGCATGCACATGCCAATAGGTCTTATGAAGATTTTGATCCTTTGTTTGTGTGGCGTAGAGAAGAGGGTCGTGACACCCTTGAACTTCATCTTCCAGGTTTTAAGAGAGACCAAATACGAATTCAGATAAACCATGTTGGTTTGCTGATAATAACTGGGGAGCGTCCTTCGGAAGGAAACAGATGGAAACGTTTCAAGAAAGAATTCGAAATCCCATCATATTGCAACGACGATGCAATTCATGGCAATATGATGCAGAGCATTCTTTCGGTGGTGATGCCGAAGAAGAGCCCTCTGATTCTTCATGAGGAGCAAGAAATGAAGGAAGAGAAAAGGGGAAATAAGAGAAAAGGAGAAATATCAGAAGAAAATGATATGGAAGAATACCAGTTTGAAGAAGATGATGATAAGAGGGTAGCGCAGGAAACAACTAGAGATGTTGCCCTAAAATTCATGCTTGTGATGGTTCTCATATTGGTTGCAGCAAGTTACATATCAGATGTAAGCAAAAGCCTCATGGCTCAAGCTCATTCCTATTTTCACAACTAG 561 0.4064 MEIPKHAHANRSYEDFDPLFVWRREEGRDTLELHLPGFKRDQIRIQINHVGLLIITGERPSEGNRWKRFKKEFEIPSYCNDDAIHGNMMQSILSVVMPKKSPLILHEEQEMKEEKRGNKRKGEISEENDMEEYQFEEDDDKRVAQETTRDVALKFMLVMVLILVAASYISDVSKSLMAQAHSYFHN* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1178 186 CDD ACD_sHsps-like 30 99 - -
Pvu1g1178 186 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 114 IPR002068 -
Pvu1g1178 186 Pfam Hsp20/alpha crystallin family 24 103 IPR002068 -
Pvu1g1178 186 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 6 184 - -
Pvu1g1178 186 PANTHER HEAT SHOCK PROTEIN 26 6 184 IPR045045 -
Pvu1g1178 186 MobiDBLite consensus disorder prediction 110 141 - -
Pvu1g1178 186 SUPERFAMILY HSP20-like chaperones 12 102 IPR008978 -
Pvu1g1178 186 Gene3D - 1 102 IPR008978 -
Pvu1g1178 186 MobiDBLite consensus disorder prediction 110 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1178 Pvu-Chr1 31767877 31769517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1178 - - gmx:100801505 273.478