Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1165 ATGGCTGAAGTTTTTACCAAGGCGAGTTTCGTTTCTTCTTTGCTTGGTAGTAGTCAACGCCACCATCGAAGGGTGTCGACGGTTCCTGATACTTGTACCTTTGTTTCTGGCGTCGGAGGGTCTCCTTCTCTCAAGTTAAAGTCTCCGATTCTCAGATCTTGGTCCCCTTCTTCTGAGTTTCAGGGTAAACAGCTTCTCTTTCGTGTAAATAGAGGAAAGCCCAACAGGGTCAGTTCGCGGTTGAGAGCGTCAACTGCTGCTCAGATGACCCTTAGAATAGGGAAAGTTCAAAAATGGTGGGAAAAGGGGCTTCAACCCAACATGAAAGAGGTGACTTCGGCCCAAGACCTTGTGGAATCACTGTTAAACGCAGGGGACAAGTTGGTGGTGGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGCAAAGCCCTTCACCCTAAGATATGTCAACTGGCAGAGATGAATCCTGATGTTCAATTCCTTCAGGTGAACTATGAGGAGCATAAGTCCATGTGTTATAGCCTCAATGTCCATGTTCTACCCTTCTTCCGCTTCTATAGAGGTGCTCATGGTCGATTATGTAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAGAGACGCATTGGCCAAACACTCCCCAGATAGATGCAGCTTGGGCCCAACCAAAGGGTTAGAGGAGAAAGAGCTCCTAGCTCTTGCTGCCAACAAAGATCTTTCCTTTACCTTGCCAAAACCTTTACAACCTGAACACGCAAATGAAGGGTTGGCAACTGCTCCTGCTCCTGTTCCTAGTTCAGAATCTCTTCCTTTACCTTCACTGACCCTCAATTCTGAGGTCTCCCAAGAGAGAACCTTGACCACTGCTGGGAGATGA 879 0.4755 MAEVFTKASFVSSLLGSSQRHHRRVSTVPDTCTFVSGVGGSPSLKLKSPILRSWSPSSEFQGKQLLFRVNRGKPNRVSSRLRASTAAQMTLRIGKVQKWWEKGLQPNMKEVTSAQDLVESLLNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHSPDRCSLGPTKGLEEKELLALAANKDLSFTLPKPLQPEHANEGLATAPAPVPSSESLPLPSLTLNSEVSQERTLTTAGR* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1165 292 Pfam Thioredoxin 119 189 IPR013766 -
Pvu1g1165 292 MobiDBLite consensus disorder prediction 245 292 - -
Pvu1g1165 292 ProSiteProfiles Thioredoxin domain profile. 77 215 IPR013766 -
Pvu1g1165 292 CDD TRX_family 124 188 - -
Pvu1g1165 292 SUPERFAMILY Thioredoxin-like 97 213 IPR036249 -
Pvu1g1165 292 Gene3D Glutaredoxin 101 218 - -
Pvu1g1165 292 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 1 292 - -
Pvu1g1165 292 MobiDBLite consensus disorder prediction 269 292 - -
Pvu1g1165 292 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1165 Pvu-Chr1 30959982 30962394 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1165 - - var:108327816 466.848