Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1163 ATGCCATGGTTCGTTCTTCCTTCCTCTACCACTGCTCTCAACGCCGTGTTGCAGGCTCTTTCAAGGACTTCTTCTTCATCCCCCACAACCTTAGCACTCTTCACCTCTCTTTTCATTCTCTTCTACATTTACTCCACCTCCAACCTCTTCTCCCATAACAACCACCATTCCACTTCTCTTTTCAAACCTCCCTCTCCCTTTTCCACTACCCCTTCTATTTCCACCACACCCCATTTCGACCCTATCTTCCACAACAATGATTATGAGTCCACCAAGTCTCAGTCTTTCCAACTGGGGTATGGGCTCAGACCACAAAGCCAACGGGGTCTGCCCCTGCCACAGCAATTCAGCCCAAAGGGAAAATTTGAGAATAACAACGACGTTTTCCATGATAGAGAGATATTTCTGGAAGACTATATAGAAATGAATAGGAGCTTTAAGATATATGTTTATCCTCACAGGGAAGATGATCTTTTTGCAAACGTGCTTTTGCCTATACTTACGAAGAGCCATTTCATTACAATTGAACCAACAGAAGCAGATATTTTCTTTCTGCCCTTTTCCATAGCAAGATTGCGGCATGATAGAAGAGTTGGCGTGGGAGGTATACAAGACTTCATTAGAGACTACATTCAGAACATCAGTCATAAGTATCCATATTGGAACCGCACAGGTGGTGCTGATCACTTTTATGTTGCTTGTCATTCAATTGGAAGGTCTGCCATGGACAAAGCGCCTGATGTGAAATACAATGCCATTCAAGTTGTATGCTCATCTAGTTATTTCCTTACTGGGTATATTGCTCATAAGGATACATGTCTACCACAAATTTGGCCAAGAAAAGGGAATCCCCCTAACCTTGATTCATCAAAGAGGAAAAAGCTAGCTTTCTTTGCCGGAGGAGTTAATTCCTCAGTACGTGTAAAGCTTGTTGAGACATGGAAAAATGATTCAGAAATCTTTGTGCACCATGGAAGGCTTAACACACCATATGCAGATGAATTGTTAGGAAACAAGTTTTTCCTTCATGTTAAGGGCTTTGAATTGAACACAACTCATATTGGAGACTCTCTATATTATGGTTGTATTCCCGTGATCATTGCCAACTACTATGGCCTTCCCTTCGCTGATGTCAGGAAACACTTCCAATGGCATTCACCTCCGCAAGACTTTGATCCGTTTTACATGGTTATGTATGAATTATGGCTTAGACGAAGTTCTATAAAAATTTGGTCGGAAAATTCTTAG 1248 0.4175 MPWFVLPSSTTALNAVLQALSRTSSSSPTTLALFTSLFILFYIYSTSNLFSHNNHHSTSLFKPPSPFSTTPSISTTPHFDPIFHNNDYESTKSQSFQLGYGLRPQSQRGLPLPQQFSPKGKFENNNDVFHDREIFLEDYIEMNRSFKIYVYPHREDDLFANVLLPILTKSHFITIEPTEADIFFLPFSIARLRHDRRVGVGGIQDFIRDYIQNISHKYPYWNRTGGADHFYVACHSIGRSAMDKAPDVKYNAIQVVCSSSYFLTGYIAHKDTCLPQIWPRKGNPPNLDSSKRKKLAFFAGGVNSSVRVKLVETWKNDSEIFVHHGRLNTPYADELLGNKFFLHVKGFELNTTHIGDSLYYGCIPVIIANYYGLPFADVRKHFQWHSPPQDFDPFYMVMYELWLRRSSIKIWSENS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1163 415 Pfam Exostosin family 160 379 IPR040911 -
Pvu1g1163 415 PANTHER EXOSTOSIN-LIKE PROTEIN-RELATED 377 410 - -
Pvu1g1163 415 PANTHER EXOSTOSIN-LIKE PROTEIN-RELATED 113 378 - -
Pvu1g1163 415 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 113 378 IPR004263 GO:0006486|GO:0016757
Pvu1g1163 415 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 377 410 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1163 Pvu-Chr1 30840098 30847961 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1163 - - pvu:PHAVU_001G112000g 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1163 1 30840098 30847961 Pvu1g1163 1 30840098 30847961 ECH