Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1162 ATGGCGAACGATCCCAGACAGAACGAAGCCCAAGTGGCGTTAATTCTGGGTCCGGATTCAACTCATCTGGAATCCCTAATTTCACAGTTAATGTGTACCTCCAACGAGCAGCGCTCTCAGGCGGAGTCTCTCTTCAACCTCTGCAAGCAGGCCCGTCCGGAATCCCTCCTCCTCGCCCTGGCCCACCTCCTCCACACCGCCCCCAACCCGGAGACCCGCACCATGTCCGCTATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACTCCTTCCTCTGGCCTCTCCTCTCCCCCGCCGCCCGCTCCTCCCTCCACTCCCTTCTCCTCTCCTCCCTCCAACAAGAGCCCGTCAAATCCATTGCCAAGAAGCTCTGCGACACCGTCTCCGAGCTCGCCGCCGCAATTCTCCCCGAAGACCCCGCCGCCTGGCCCAACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCCCCCGAACCCAGGCTTCAGGAAGTCGCGCTCCTCATATTCGCCCAATTAGCACACTACATCGGTCAAACCCTACTCCCTCAATTGTCCACTCTCCACTCCGTCTTCCTCCGCTGCCTCCACTCCTCCACCCCATCCGACGTCCGTATCGCCTCCCTCGCCGCCTCCATCAACTTCATCCAGTGCCTCACCAGTTCCGCTGACCGCGACCGCTTCCAGGACCTCCTCCCTCTCATGATGCAGACGCTCACCGAGGCACTGAACTCCGGCCAGGAGGCCGTTGCGCAAGAGGCGCTCGAGCTTCTTATCGAGCTCGCCGGTACCGAGCCGAGGTTCCTCCGCCGCCAGATTGTCGACGTCGTGGGCGCCATGCTGCAGGTCGCGGAAGCTGAGGCCTTGGAGGAAGGGACGCGGCACTTGGCGATTGAGTTTGTTGTCACTCTTGCCGAGGCCAGGGAACGCGCCCCTGGGATGATGAGGAAGTTGCCGCAATTTGTGAGGAAGCTTTTTGGCGTGTTGCTGAATTTGTTGCTGGATATTGAGGATGCTCCTGCGTGGCACGCTGCAGTGGACGAGGAAGAGGATGCGGGTGAGACCAGTAACTATGGGTTTGGACAGGAGTGTTTGGATAGGCTTTCGATTTCTCTTGGCGGGAACACCATTGTGCCTGTTGCTTCTGAGTTGTTGCCCACTTACTTGTCTGCTCCTGAGTGGGAAAAACACCATGCTGCACTCATTGCGCTTGCGCAGATTGCGGAGGGTTGTTCGAAGGTGATGATAAAGAATCTCGAACAGGTATTGTCGATGATTTTAAATTCATTTTGTCATCCCCATCCTCGAGTGCGATGGGCAGCTATAAATGCAATTGGGCAGTTGTCCACGGATTTGGGGCCAGATTTGCAGGTTAAATTTCATCACTTAGTGCTGCCGGCTTTGGCTGGTGCTATGGATGATTTTCAAAATCCAAGAGTGCAGGCACATGCTGCTTCTGCTGTGCTAAATTTCACTGAGAATTGTACCCCTGATATTCTAACGCCTTACTTAGAAGGGATTGTGAGCAAACTTTTGGTACTCTTGCAGAATGGCAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCTTTGGCATCAGTTGCAGATTCTTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTTGTTAATGCAAATGATAAATCTAATCGAATGCTTCGAGCCAAAGCTATGGAGTGCATTAGTTTGGTAGGGATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAGTCTCAACTGGATCCTGATGATCCAACTGCTAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTTTGATCCAGTCTGCACAACTTAAACCTGATGTGACCATTACATCTGCAGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATTACACTTGGGGATAAAAGGATAGGCATTAAGACTAGTGTCTTGGAGGAGAAGGCTACTGCTTGTAATATGCTATGTTGCTATGCTGACGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTCAGGAAGGCAGCAGTTTCAGCCATGCCAGAACTGTTAACCTCAGCGAAATCAGCTGTAGAGAAGGGACAATCACAGGGTCGTGATGAGACTTACATAAAGCAGTTATCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTTCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTCTCTGGACCACATCTAGATGAAAAGCAAGTGCGGAGTATTGTTGACGAGATTAAACAAGTTCTTACAGCCAGTTCAACAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAGCTACTCAAGGAAGAAAATGAGCAAGAAGAGGATCTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGACATCCTTCTTGCCTTTCTTTGATGAGCTATCCTCATACATAACACCTATGTTTGGTAAAGATAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAACTGCCCTCAAATATTACGATTCTTTCCTTCCATTCTTACTAGAAGCTTGCAATGATGAATATCCAGATGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGCGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTCTCGAGGTTAGATGCTGTGATAAGGCATCCAAATGCACAACTTTCTGATAACGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTTCACCGTGATAGCATAAATGCGACACAGGTTGTTCCTGCCTGGCTGAGTTGCTTGCCTATAAAAGGTGATTTAATTGAGGCTAAGGTTGTGCACGACCAACTTTGTTCAATGGTTGAAAGATCAGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATTGTCGCAGTTTTCGCTGAGATTTTATGTGCGGGAAATGATCTGGCAACTGAACAAACTGTGAGTCGGATGATTAATCTATTGAGGCAGCTACAACAGACTTTGCCACCTTCAACCCTTGCTTCAACCTGGTCTTCCTTGCAGCCTCAGCAGCAGCTTGCACTTCAGTCCATCCTCTCATCCTAG 3354 0.4872 MANDPRQNEAQVALILGPDSTHLESLISQLMCTSNEQRSQAESLFNLCKQARPESLLLALAHLLHTAPNPETRTMSAILLRRHLTRHHDSFLWPLLSPAARSSLHSLLLSSLQQEPVKSIAKKLCDTVSELAAAILPEDPAAWPNLLPLLFQWVTSPEPRLQEVALLIFAQLAHYIGQTLLPQLSTLHSVFLRCLHSSTPSDVRIASLAASINFIQCLTSSADRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGAMLQVAEAEALEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVLLNLLLDIEDAPAWHAAVDEEEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFCHPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLEGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDPDDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLIQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLTSAKSAVEKGQSQGRDETYIKQLSDYIIPNLVEALHKEPEVEICSSMLDALNECIQVSGPHLDEKQVRSIVDEIKQVLTASSTRKHERAERAKEEDFDAEERELLKEENEQEEDLFDQVGDCLGTLIKTFRTSFLPFFDELSSYITPMFGKDKTSEERRIAICIFDDVAEHCRETALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDAVIRHPNAQLSDNVMAYDNAVSALGKICQFHRDSINATQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1162 1117 Pfam Importin repeat 6 786 890 IPR041389 -
Pvu1g1162 1117 Gene3D - 19 1116 IPR011989 -
Pvu1g1162 1117 Coils Coil 832 852 - -
Pvu1g1162 1117 SMART TOG_3 370 611 IPR034085 -
Pvu1g1162 1117 SUPERFAMILY ARM repeat 19 828 IPR016024 -
Pvu1g1162 1117 Pfam Importin repeat 287 378 IPR041653 -
Pvu1g1162 1117 Pfam HEAT repeats 387 486 - -
Pvu1g1162 1117 Pfam HEAT repeat 925 953 IPR000357 GO:0005515
Pvu1g1162 1117 PANTHER IMPORTIN BETA 14 1116 IPR040122 GO:0006606
Pvu1g1162 1117 PANTHER BNAC09G37860D PROTEIN 14 1116 - -
Pvu1g1162 1117 SUPERFAMILY ARM repeat 689 1092 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1162 Pvu-Chr1 30808842 30819870 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1162 K20222 - gmx:100797431 1949.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1162 1 30808842 30819870 Pvu1g1162 1 30808842 30819870 ECH