Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1154 ATGAAGAGCATGGTGACGCCATTGATGAGGGTCTCACCCTTTCGTCACCAGAATGGCCATAATACCCTTCCCTTATTCTCTCTCGCACGCTACCCTTCCTCACCAAACTTCTCTTTCTCCCCTCTCTCTCTCAGTCTTTCCATGGCCGCTTCATCCCAATCCTCTTCTCCGGCTGTGTCGCGTGGTGATGCTAACATGGACAAAGATGGTGTATTTCAATTGATTCAAGCACATCAGGAAAAAGCTGCTAGACTTCCACCGGTTGAGGAAATTCGAACTGTCCTTGATCGTAGCGTTCGCGGAATGCTCTCTACATTCTCTAAGAAGTTCGATGGCTATCCATCAGGGTCTATGGTTGACTTTGCATGTGACGCAAATGGATATCCTATATTAGCAGTGAGCGACCTGGCAGTTCATTCCAAGGACCTAACTGCCAATTCTAAATGTTCATTACTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATTACTTTACACGGTGATGCTATCACTGTACCTGAAAAGGATAAAGAAGCTGTTCGAGCTGCATATTTGGCGAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCAATTCTTGCGCATTGAACCGAAAGTTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTGTTAGGATCAGGAGAGTTTACTGGAGATGAGTATAAATCTGCAAAAGTTGACCCCATAGCTCAATTTTCCAAGCCAGTGACGTCTCATATGAACAAAGATCATGCTGACGATAACAAAGTGATTGTGCAGCATTGGACTTCAGTTCCAGTGGACTTTGCATACCTTCTAGATTTGGATAGTCTTGGTTTCAATGTTAAGGCTGGTTATCAGGATGATACTTTCAAGCTTCGTGTACCTTTCCCTCGACGTGCAGAAGATAGAAAGGATGTGAAGACTCTCATTGTTGAGATGCTTCAAGCTGCCAGGCCTAAAGCTGAATGA 984 0.4461 MKSMVTPLMRVSPFRHQNGHNTLPLFSLARYPSSPNFSFSPLSLSLSMAASSQSSSPAVSRGDANMDKDGVFQLIQAHQEKAARLPPVEEIRTVLDRSVRGMLSTFSKKFDGYPSGSMVDFACDANGYPILAVSDLAVHSKDLTANSKCSLLVARDPEDRTDLVITLHGDAITVPEKDKEAVRAAYLARHPNAFWVDFGDFQFLRIEPKVVRFVSGVATALLGSGEFTGDEYKSAKVDPIAQFSKPVTSHMNKDHADDNKVIVQHWTSVPVDFAYLLDLDSLGFNVKAGYQDDTFKLRVPFPRRAEDRKDVKTLIVEMLQAARPKAE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1154 327 Pfam Domain of unknown function (DUF2470) 245 318 IPR019595 -
Pvu1g1154 327 SUPERFAMILY FMN-binding split barrel 89 323 - -
Pvu1g1154 327 Gene3D - 237 327 IPR037119 -
Pvu1g1154 327 PANTHER FMN-BINDING SPLIT BARREL-RELATED 55 324 - -
Pvu1g1154 327 PANTHER CREG1 PROTEIN 55 324 - -
Pvu1g1154 327 Pfam Pyridoxamine 5'-phosphate oxidase 92 215 - -
Pvu1g1154 327 Gene3D - 69 222 IPR012349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1154 Pvu-Chr1 30599776 30604506 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1154 - - gmx:100793739 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1154 1 30599776 30604506 Pvu1g1154 1 30599776 30604506 ECH