Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1152 ATGGAAACCTTTCTTATGTACAATATAAGACTAGGGAACTTGTTTGCAATGGCAACTCTGAGCAATTCAACAAATATCTTTTGGCAAGATTGTCAAATAGGAAGGCCTGAAAGGCAGCAGCTACTTAACCAAAAGGGATGTGTTGTATGGATTACTGGACTCAGCGGATCAGGAAAAAGCACATTGGCATGTTCCCTAAGCAGAGAACTGTACTCAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTTAGGCATGGACTAAACAAGGATCTTGGTTTTAAAACTGACGACCGCACTGAAAACATTCGCAGAACCGGAGAAGTGGCAAAACTCTTTGCTGATGCGGGTTTGATATGTGTTGCCAGTCTGATATCTCCTTACAGAAGAGATCGAGACACTTGCCGATTCATGTTACCTGATAGGAATTTTATTGAGGTTTTCATGAACATGCCTCTAGAATTGTGTGAGGCACGAGATCCAAAAGGCCTCTATAAGCTTGCTCGTGCGGGGAAAATCAAAGGTTTTACCGGCATTGATGACCCATATGAGCCACCCATAAATTGCGAGATTGAGATAAAGCAGGAGGATAGTGGCGTTTGTCCAACACCCACTTTGATGGCTGGACAAGTAGTTACTTACTTGGAGAAGGAAGGTTTTCTTGAACATTAG 675 0.4252 METFLMYNIRLGNLFAMATLSNSTNIFWQDCQIGRPERQQLLNQKGCVVWITGLSGSGKSTLACSLSRELYSRGKLSYVLDGDNLRHGLNKDLGFKTDDRTENIRRTGEVAKLFADAGLICVASLISPYRRDRDTCRFMLPDRNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPINCEIEIKQEDSGVCPTPTLMAGQVVTYLEKEGFLEH* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1152 224 Pfam Adenylylsulphate kinase 45 198 - -
Pvu1g1152 224 CDD APSK 48 195 IPR002891 GO:0000103|GO:0004020|GO:0005524
Pvu1g1152 224 Hamap Adenylyl-sulfate kinase [cysC]. 44 220 IPR002891 GO:0000103|GO:0004020|GO:0005524
Pvu1g1152 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 198 IPR027417 -
Pvu1g1152 224 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 15 223 - -
Pvu1g1152 224 TIGRFAM apsK: adenylyl-sulfate kinase 28 198 IPR002891 GO:0000103|GO:0004020|GO:0005524
Pvu1g1152 224 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 15 223 - -
Pvu1g1152 224 Gene3D - 16 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1152 Pvu-Chr1 30495346 30500339 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1152 K00860 - gmx:100793200 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1152 1 30495346 30500339 Pvu1g1152 1 30495346 30500339 ECH