Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1150 ATGCAATCGCACCTTGTGGTGGGATCCATCTCCGTCGGACGCTATGGTGGCGCCGCCGATTCCAGTCCCTTCCACTCCGCCGCACCTTCCTGCTGGGCCAACCCTCCTCGCCGGCGCTCTCCACTCGTCGTGGCCTCCTCCTCGCCCGCTGCCGTCAACGGCGGCCATAATCACTACGCCGTGCTCGGCGTCGCCCGCACTGCCACCGCTGTCGAGATCAAACGCGCTTATCGCCTCCTCGCCCGCAAGTATCATCCCGACGTTAGCAGGGATCCGCATGCTGCAGAATTATTCAAGAGCATCCATCATGCATATGAAGTACTATCTAATGAAGCAACTAGAGTTCAGTATGATCAAGAACTTCAATTTAGTCAGAACTCTCCCAGGGAAAAATGGAGTTACAGTACTGAGTTTGAAGATCAGGTAAGAGTCTATAGATGGGCTCAACGGAGGAAAAGAATGCATAGTGAAAGATACGGGGAGGATTACAATGTAAATGAGGAGTACAGCAGTGAAACAGAGGAGGAAGAAGGTGAAGAGAGAGGTTCTTTTATTGAAGTGCTTAGATCAGCGTTCTTGTCATTATTTTTGTTTCAGACGTTTGGATCCCGACTCTCTCTAACATTTAGCGGCCTGACAGCATTGTTCGATGAAAAGTTGGACACCGGTTATAAAATTGGTCATGTAATAGCATGGATTTTGGGTGGGAGGGGTGGCATATTGCTAACGTTGTGCTTGTCTTTTGCAAGTTGGGTTTGCGGGAAAACCAGTAGTAGTGTTGTTGCACTAATTGTGGTGGCCATGTGGGTTGGCTCCTACCTCGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTGGCGCTTCTCTACATGTCCATTAAGCTACAGTCTGACCTAATATAA 903 0.4972 MQSHLVVGSISVGRYGGAADSSPFHSAAPSCWANPPRRRSPLVVASSSPAAVNGGHNHYAVLGVARTATAVEIKRAYRLLARKYHPDVSRDPHAAELFKSIHHAYEVLSNEATRVQYDQELQFSQNSPREKWSYSTEFEDQVRVYRWAQRRKRMHSERYGEDYNVNEEYSSETEEEEGEERGSFIEVLRSAFLSLFLFQTFGSRLSLTFSGLTALFDEKLDTGYKIGHVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALIVVAMWVGSYLARYAPLPQGALLALLYMSIKLQSDLI* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1150 300 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 286 - -
Pvu1g1150 300 SMART dnaj_3 56 113 IPR001623 -
Pvu1g1150 300 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Pvu1g1150 300 PRINTS DnaJ domain signature 59 77 IPR001623 -
Pvu1g1150 300 PRINTS DnaJ domain signature 77 92 IPR001623 -
Pvu1g1150 300 PRINTS DnaJ domain signature 93 113 IPR001623 -
Pvu1g1150 300 SUPERFAMILY Chaperone J-domain 56 124 IPR036869 -
Pvu1g1150 300 CDD DnaJ 57 110 IPR001623 -
Pvu1g1150 300 ProSiteProfiles dnaJ domain profile. 57 121 IPR001623 -
Pvu1g1150 300 Gene3D DnaJ domain 45 140 IPR036869 -
Pvu1g1150 300 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 286 - -
Pvu1g1150 300 Pfam DnaJ domain 57 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1150 Pvu-Chr1 30124158 30130861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1150 57 129 Miscellaneous Gene Families AT1G79030 39.474 1.51e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1150 - - gmx:100791619 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1150 1 30124158 30130861 Pvu1g1150 1 30124158 30130861 ECH