Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1146 ATGAGACCCCCCAGAGGCGGTGGGCGCGGTGGAGGTTTCAGAGGTGGCCGCGACAGTGGCGGTTTCAGAGGTGGCCGCGACGGCGGCGGTCGCGGTAGAGGTGGATTTGGTCGTGGCGGTGGAGGACGCGGCGGTTTTCGCGACGAAGGGCCACCCTCCGAAGTCGTAGAGGTTGCAACGTTTATGCATGCGTGTGAGGGAGATGCAGTGACGAAGCTTACGAACGAGAAAATTCCATTTTTCAATGCTCCTATCTATCTGAAAAACATGACTCAGATTGGGAAAGTTGATGAAATATTCGGCCCCATCAACGAATCTTACTTCTCGGTTAAAATGATGGAAGGGATTGTTGCTACCTCTTATTCAGCTGGTGACAAGTTTTACATTGACCCAAGGAAACTGTTACCTCTTGCAAGATTTCTTCCACAACCCAAGGGACAAGCACAGGGTGGTAGAGGTGGAGGAGGACGTGGTGGAGGCAGAGGTTTTCGTGGAGGTGGTGGTGGCGGTTTTCGTGGAGGTGGTGGTTTTCGTGGAAGAGGTGGCCCAAGGGGTGGTAGAGGTGGTCCTCCTAGGGGTGGGGGTTTCAGGGGAAGGGGAAGATCGTAG 609 0.5452 MRPPRGGGRGGGFRGGRDSGGFRGGRDGGGRGRGGFGRGGGGRGGFRDEGPPSEVVEVATFMHACEGDAVTKLTNEKIPFFNAPIYLKNMTQIGKVDEIFGPINESYFSVKMMEGIVATSYSAGDKFYIDPRKLLPLARFLPQPKGQAQGGRGGGGRGGGRGFRGGGGGGFRGGGGFRGRGGPRGGRGGPPRGGGFRGRGRS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1146 202 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 201 - -
Pvu1g1146 202 Pfam Gar1/Naf1 RNA binding region 55 141 IPR007504 GO:0001522|GO:0042254
Pvu1g1146 202 MobiDBLite consensus disorder prediction 1 52 - -
Pvu1g1146 202 SUPERFAMILY Translation proteins 56 130 IPR009000 -
Pvu1g1146 202 MobiDBLite consensus disorder prediction 143 202 - -
Pvu1g1146 202 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 201 - -
Pvu1g1146 202 Gene3D Probable tRNA pseudouridine synthase domain 51 142 IPR038664 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1146 K11128 - gmx:100799823 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1146 1 30076980 30079024 Pvu1g1146 1 30076980 30079024 ECH