Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1144 ATGGCAGCTGTTGCTCCTACTTCTGACAAAACTGCAGATTTATTGCAAAATTTGACCCTTGATTCGGAGTCAAAACCCATTGGAGTTACCGAGCCTGTGAAGAAGAATGGACCTGGTTTTTCCAAGGGTGGGATGGGCAAGCCGTTCAATCCAAATTCAAGCTTTGTTCCAAATGGATACTCTTCGGCCTACTATTATGGAGGTTATGATGGGCAAGGTGATTGGAATGTTTATTCCAGATATATGAACCTTGATGGAGGGATGACTCAGGGTGTTTATGGAGACAACTGCTCTTATATGTATCATCAAGGTTATGGTTATATGCCGTATGGAGCATATGCACCGCCCAATTCCTCTTCTCCAATGATTCAACAAGATGGTCAGCATTATGCGCTGCAACAGTACCAATATCCATGCTCTTATTACAAATCTCCAGCTTCTGCTGATGTGTCATTTACTCCAAACAAATTCACTGCTACAGAAGGAGAAATATCAACTGCAGTTGATGCTGATCACGTTGTTTCATCAAATGTTACAAATAAAGGAAACACTGTTAACATGGCCAATAGTGATTTTACAAATAAAAATGGGTTAAAGTCATTTTTAACGAGTTCTCAGCATACAAGTTTGCATTCAAGTGATTCTTATCAAGGGACTAGCTTGCCAACAACTTATGCCCCTTTGTCAGGATATCAGGGCCCAAGAATGGGTACCCATGGTACACAATTGCCAGTCCCGTCAGATGTGTCTTTAATATCTGATAGACAGTCCAAACATGGAGCCAAGGCTGGTTTATCCTCATCAATGGTGCCTGTCAAAGATTTTACTTCTCAAAGGAATCAAGGACTTCTTCAGCAACTTCCACCATTTGCGAACATGAATGGTTCCAGACATCCATCTGGACTTGAACTGGTTTCTGGATTCATGAATGGGATGTATCCAAGCAACAGGATGTACGGCCAATATGGGAACACATTTAGGGCTAATTCTCGTTTTGGATCTAGAATGGGCTCGGTTGATTATAAGCGTAATGCCACAGGTCATGGCTATGGTCTTAACCATTTTAAAAAAAGTATGGATGGTTTCAGTGAGCTAAACAAGGGACCAAGAGCTGCCAAAAGTTCTGATTATAAAAATATAAAGAGTCCTGGACCTGTTACATTACTACTTAAAGGACAGAACCTTCCAGTGAAGAGCGATAACAAAGAAGTTCTTTTGGTACCCAATAAGGAACAATACAATGGGAAATTATTTTCTGAGAATTATTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCATAAAAGCATAAAGTATAGTGTTTGGGCAAGTACCCCTAATGGCAATAAAAAACTGGATGCGGCATATCAAGAAGCAAAGGAGAAGACTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGTTGGGTCCTGTTGATTTTGGTAAAAGTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGCGTGATGAGGCACATAACACTTGAAAACAATGAAAACAAACCTGTAACGAATAGCAGGGATACTCAGGAGGTTAAGTTTGAGAAAGGAGTTCAAATTGTGAAAATTTTCAAGGAGCATTTAAGCCAAACATGCATCTTGGATGATTTTGGGTTTTACGAGGCTCGTGAAAAGGCAACTCAAGAGAAGAAATCTAAGGAGCAGCAGTTCCCTAAACAGATCAGCAAACCCAGTGATTTAACTATTGGGACAGTCACATTGCTAAAGTCTCTTGATGCTACCTTGATGAATGAAGCTGCTACTGCAAATACAGCAGAAGATAGAATGAATTCAGAGTCAGAGGGGCTACTAGAAGGGGATGGATCGACCACAGCACCTGAAGACTCTTCTAAGAGCTGTTAA 1977 0.4052 MAAVAPTSDKTADLLQNLTLDSESKPIGVTEPVKKNGPGFSKGGMGKPFNPNSSFVPNGYSSAYYYGGYDGQGDWNVYSRYMNLDGGMTQGVYGDNCSYMYHQGYGYMPYGAYAPPNSSSPMIQQDGQHYALQQYQYPCSYYKSPASADVSFTPNKFTATEGEISTAVDADHVVSSNVTNKGNTVNMANSDFTNKNGLKSFLTSSQHTSLHSSDSYQGTSLPTTYAPLSGYQGPRMGTHGTQLPVPSDVSLISDRQSKHGAKAGLSSSMVPVKDFTSQRNQGLLQQLPPFANMNGSRHPSGLELVSGFMNGMYPSNRMYGQYGNTFRANSRFGSRMGSVDYKRNATGHGYGLNHFKKSMDGFSELNKGPRAAKSSDYKNIKSPGPVTLLLKGQNLPVKSDNKEVLLVPNKEQYNGKLFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKTGGCPIFLLFSVNTSGQFVGLAEMLGPVDFGKSVDYWQQDRWTGCFSVKWHVIKDIPNSVMRHITLENNENKPVTNSRDTQEVKFEKGVQIVKIFKEHLSQTCILDDFGFYEAREKATQEKKSKEQQFPKQISKPSDLTIGTVTLLKSLDATLMNEAATANTAEDRMNSESEGLLEGDGSTTAPEDSSKSC* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1144 658 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 658 - -
Pvu1g1144 658 ProSiteProfiles YTH domain profile. 425 562 IPR007275 GO:0003723
Pvu1g1144 658 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 658 IPR045168 -
Pvu1g1144 658 MobiDBLite consensus disorder prediction 625 658 - -
Pvu1g1144 658 Gene3D ph1033 like domains 406 576 - -
Pvu1g1144 658 Pfam YT521-B-like domain 425 563 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1144 Pvu-Chr1 29981937 29986345 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1144 - K20102 gmx:100818027 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1144 1 29981937 29986345 Pvu1g1144 1 29981937 29986345 ECH