Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1143 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAACCTCAACTTAATCAAGGCCTCCTCAGCAGCAAACACCTCTACCACCACTCTTCCCACTGCTGATTCACTCACTCAGAAATTTGGCAGAAAAGGCATCAAGTTCTTCGACTCTGATAACATCCCCATTGTGGAGCTCACAATCAGAAATGGCAGCTCCTTGAGGCTAAGCATACCTGATGCTCATGTCACATCATACAGACCAAAAGTTCATTGGAAAGATGATGGTTTCGAGGAGGCTCTTTACACAATTCCTGCAACTGAATCCGCTCCATACAAGGCTAAAGGTGGGGTTGGTTTGGTCATGAATGAAATACTGCAACCTGGAGCCAAAGGGTTACTCCCTTCCACTTTAGAGTGGACTGTTACTGATGTTGACTCTGATGCCATTGATGCTCTCCAGGTTGAATTGAGCTGCACTAGTAGATTCTTTGATCTCACATACATCGTGACTCTCTATCCTGTGAGCATGGCCACAGCAGTGGTAGCTAAGAACCTAGGCCCCAAGCCTGCCACTCTAACCAACGCTATACTAAGCCATTTTAGATCTAAGACAAGAGCTGGAACAGCAGTTCAAGGCCTCAGAAGCTGCTCATATATCCCTCACTCTCCTCCATCTTCTCCTTTTCAAATCTTGACTCCATCTGAAGCTACCTTATTTGAGCCTCCTAGATGGTTTTCCTTTGGTGCTGAACCTGAAGTCAAGTTTGGTACGTGGGGTAAGCAAGATTTGACCATGACCCTCCTTGAGAATAAGATGAGTAGAGTTTATTCAGCACCTCCAGAGGAAAGATTAAAGACATTCTATAATACCCCTCCTTCCAAGTACGAAACCATTGACCAGGGACGTGAGATTTTCTTCAGGGTGATAAGAATGGGTTTTGAGGATATTTATTTATCAAGCCCTGGTTCCTTGTCAAAGAAATATGGAAAGGACTACTTCATCTGCACTGGCCCTGCTTCATTACTGGTGCCTGTGACTGTGAATCCTGGTGAAGAATGGAGAGGGGCACAGGTGATTGAACATGATAATCTAACATGA 1071 0.4472 MASFLSLSLPNLNLIKASSAANTSTTTLPTADSLTQKFGRKGIKFFDSDNIPIVELTIRNGSSLRLSIPDAHVTSYRPKVHWKDDGFEEALYTIPATESAPYKAKGGVGLVMNEILQPGAKGLLPSTLEWTVTDVDSDAIDALQVELSCTSRFFDLTYIVTLYPVSMATAVVAKNLGPKPATLTNAILSHFRSKTRAGTAVQGLRSCSYIPHSPPSSPFQILTPSEATLFEPPRWFSFGAEPEVKFGTWGKQDLTMTLLENKMSRVYSAPPEERLKTFYNTPPSKYETIDQGREIFFRVIRMGFEDIYLSSPGSLSKKYGKDYFICTGPASLLVPVTVNPGEEWRGAQVIEHDNLT* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1143 356 Gene3D - 52 356 IPR014718 GO:0030246
Pvu1g1143 356 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 18 355 - -
Pvu1g1143 356 SUPERFAMILY Galactose mutarotase-like 42 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu1g1143 356 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 18 355 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1143 - - gmx:100788455 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1143 1 29979025 29980904 Pvu1g1143 1 29979025 29980904 ECH
Pvu1g1143 1 29979025 29980904 Pvu4g0851 4 13543355 13545941 PCT