Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1142 ATGGGAAGGAGTCTCAGCCCTTCGGTGTGGCAGGAGCTGGCAAATCTTGACAAAGATGATAGTCGCAAATCTGCCATGAAAGCATTGAAATCCTATGTCAAAGATTTGGATTTCAAGGCCATTCCTGTGTTTCTTGCAAAAGTTTCAGAGAGCAAGGAAAATTGTTCTGAGGAATTCACAATCTCAATCTATGAGGTTCTTGCACGGGTTCATGGTGTCAAAATTGTTCCTTTGATAGGTAGAATCATGACAACCATAATCAAGACGTTGACTTCAAGTGCTGGATCTTTCCCTCTCCAACAAGCTTGTTCAAAGGTGGTTCCTGCTATTGCAAGATATGGAATTGACCCCTCAACTCCAGAAGATCAAAGGAGGAACATAATTCAGTCCCTTTGCATGCCACTTTCTGATTCTCTTGCGAGTTCTCAGGAGGGCCTAACTTCGGGTGCTGCCCTTTGCTTGAAGGCTCTGGTGGATTCAGAAAACTGGAAGTATGCTTCTGATGAATTGGTGAATAGGGTTTGCCAGAATGTTGCTGTGGCATTAGATGGGAAGTCTGGTCAAACCAACTCACACATGGGTCTGGTTATGTCTTTGGCCAGGCGCAATGCTTTGATCATTGAAGCATATGCAAGGTTGCTCATACAATCTGGAATAAGAATGGTGAATGCTGGTCTTGTGGAGGGGAATTCTCAGAAAAGGCTTTCATCCATTCAGATGGTCAACTACTTGATGAGAAGTTTGGATTCCAGGAGCATATTCTCAGAGGTTGAATTCATAATTGAGGAGTTGGACAAGTGCCAATCTGATAAAATGGCATTTGTCCAAGGTGCAGCACTTGAGGCTTTGCAAACGGCCAAGAGAATTGCAAGTGATAAAAAGCCAAGATATGCAAAAAGTCCTTCCTCAGTGACAGGGTCAAATTTTAGTAGGAGAGAAGGAGAAAATACTTCTTCTGGTGAGGGAGAAAATACTTCTTCTACTCCTTCCTCTATTTCACCACAATCGCGCACTTTTGACTTTTTTCCTGGATATGAATCTATTGAGTCTCCTATTTCAAGCAACTTAGACTATGAAAGAAGAAGCGTGACTAGGAAGCTTTGGAGTAATGAAAATGGAGGGGTTGATGTGTCTCTGAAGGATGGCTTGTTCTCACGAGTCGTAAAAGAAAGTTCTTTATCAGAGCATTCATCGATTCATGAGTTTCCAAGTGGAGATGGATATTATACAGAGGAATTTGCTGGTTTCATGGACAGAAATCCCAGGCATGGAGTATCCAGAAGTACCACCACAAGTCCACTAAGGTCACGCACTCAGGCAACTGTTGACAGCATAAAAATCTTCAAGACCCCTAGAAAACTAATTCACTCTCTTCAAGATTCAAGTGATTTGACTTTGGGTTGTTCTAAGAAACAGAATAGAAGGTTCAAGAGTTTATCCTCAGGCAATATTGAGTGGAGTCCAGCTTCTAAATATGACCAGAACGATTTCTCTAATGATGTGAAGTGTGATAGTGAAGTAATTGAAAGTTGTGCAGAGGTTGAGTTTCAAGGTGGCTCAGAGTCGGTCTCATCAACTGATGACCTTCCTGGAGATGCCAGCAAGCAGACGTCAACCAAAGTGGTTCCAGAAGATAGGAATTTTACACCAACTGCTCTACAACAGACTAAATACAAATTGGTTTGTGGTCTTTCATTTGTTCTTCTTGCAGTGGCTACTCCTTTACTTTGGATCAATAGTCAGGATGAAGGTCATTATCTTGTACCAACATAA 1773 0.4196 MGRSLSPSVWQELANLDKDDSRKSAMKALKSYVKDLDFKAIPVFLAKVSESKENCSEEFTISIYEVLARVHGVKIVPLIGRIMTTIIKTLTSSAGSFPLQQACSKVVPAIARYGIDPSTPEDQRRNIIQSLCMPLSDSLASSQEGLTSGAALCLKALVDSENWKYASDELVNRVCQNVAVALDGKSGQTNSHMGLVMSLARRNALIIEAYARLLIQSGIRMVNAGLVEGNSQKRLSSIQMVNYLMRSLDSRSIFSEVEFIIEELDKCQSDKMAFVQGAALEALQTAKRIASDKKPRYAKSPSSVTGSNFSRREGENTSSGEGENTSSTPSSISPQSRTFDFFPGYESIESPISSNLDYERRSVTRKLWSNENGGVDVSLKDGLFSRVVKESSLSEHSSIHEFPSGDGYYTEEFAGFMDRNPRHGVSRSTTTSPLRSRTQATVDSIKIFKTPRKLIHSLQDSSDLTLGCSKKQNRRFKSLSSGNIEWSPASKYDQNDFSNDVKCDSEVIESCAEVEFQGGSESVSSTDDLPGDASKQTSTKVVPEDRNFTPTALQQTKYKLVCGLSFVLLAVATPLLWINSQDEGHYLVPT* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1142 590 MobiDBLite consensus disorder prediction 518 540 - -
Pvu1g1142 590 MobiDBLite consensus disorder prediction 298 337 - -
Pvu1g1142 590 MobiDBLite consensus disorder prediction 291 337 - -
Pvu1g1142 590 PANTHER PROTEIN SINE1 1 590 - -
Pvu1g1142 590 PANTHER GEMIN2 1 590 - -
Pvu1g1142 590 SUPERFAMILY ARM repeat 19 289 IPR016024 -
Pvu1g1142 590 Gene3D - 3 300 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1142 Pvu-Chr1 29971119 29974354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1142 - - gmx:102659858 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1142 1 29971119 29974354 Pvu1g1142 1 29971119 29974354 ECH
Pvu1g1142 1 29971119 29974354 Pvu4g0850 4 13539665 13542950 PCT