Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1131 ATGGGAGTGTTTGAGAAGTTCATCCTCTCTGTGTGGTGTCATGGCAATCAGCATTGCTTGCAATTGGCCAAAGAGAATCTGAGCAGTGTTAGGGAGTCAGCATCTTTCTTTCTGGGTTTAATCAGTGTCATTGTTTGGGTTGTTGCTGAGATACCTCAAATAATCACAAACTATAGAACAAAGTCCACTGAGGGCCTCTCTCTCACTTTCTTGGTCACATGGATAATTGGAGATGTATTCAACCTCGTTGGATGCCTGCTGGAACCTGCAACTCTTCTTACTCAATTATATATGGCAGTGCTCTATACCATTATAACTCTTGCTCTTGGTTTACAAACCATGTACTATGGACATTTATATCCTCAACTAAAATACAAGAGACAGCTAAAGGTTGAGACATTCGCAAAAACTGGACAAGGGGAAAAAGGCAGTGTTGCTGAACAGAGTATTGAATTTGAAAATTCAAATAGAAACTTCAGTCCGAGTTCTCCTATTCCTCTTCCAGCATGTCCTCGAAGAATTGCTACCGGAAGTGGATTATTCTACCAGTCAGCAAGATATTTGTCTAAGAGTCACACTCCAACAGCGGGATCCATCTTAGCACATAAAATGACATCTACTGCTGCTTTAGATTCTATACAAGAGAGCTTGCTTGGTTCAGCCATTGCAACACAATCTGCACCAGCTCCAAGGATGAAGAATACTCTTTGTATAGTTTCAACCTTAACTTTTCTTGGTGCTATCAACCTGCTTCAACAATTGAATACAAATATTAACCTGATGGCCTCAAACCCGCGGCAACAATTTGTGATTCATGTTGGAAGAAAGCTTTTTCAGGTTGGTGATGACCAGTTGCTAAAAACTGATGTTTCTGGGGGCAGTAGCATTGGGACCTTCCTTGGTTGGGCAATGACATTTGTATATTTGGGTGGAAGGCTGCCTCAAATTTGTCTAAATATCAGAAGGGGTCATGTTGAGGGACTCAATCCTTTGATGTTCATGTTTGCTGTACTTGGGAATTCCACTTATGTAGCCAGTATACTTGTGATCAGCTTGGATTGGTCAAAAATCAAACCAAATTTGCCATGGCTAGTAGATGCAGGAGGGTGTGTCCTTCTCGATTTCTTTATTTTAATGCAGTTTATATATTTCCGCTGTTTGACCTCCCAAGCCATGTAA 1179 0.4097 MGVFEKFILSVWCHGNQHCLQLAKENLSSVRESASFFLGLISVIVWVVAEIPQIITNYRTKSTEGLSLTFLVTWIIGDVFNLVGCLLEPATLLTQLYMAVLYTIITLALGLQTMYYGHLYPQLKYKRQLKVETFAKTGQGEKGSVAEQSIEFENSNRNFSPSSPIPLPACPRRIATGSGLFYQSARYLSKSHTPTAGSILAHKMTSTAALDSIQESLLGSAIATQSAPAPRMKNTLCIVSTLTFLGAINLLQQLNTNINLMASNPRQQFVIHVGRKLFQVGDDQLLKTDVSGGSSIGTFLGWAMTFVYLGGRLPQICLNIRRGHVEGLNPLMFMFAVLGNSTYVASILVISLDWSKIKPNLPWLVDAGGCVLLDFFILMQFIYFRCLTSQAM* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1131 392 Gene3D - 36 131 - -
Pvu1g1131 392 Gene3D - 296 390 - -
Pvu1g1131 392 SMART ctns 48 79 IPR006603 -
Pvu1g1131 392 SMART ctns 310 341 IPR006603 -
Pvu1g1131 392 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1 7 382 - -
Pvu1g1131 392 Pfam PQ loop repeat 296 355 IPR006603 -
Pvu1g1131 392 Pfam PQ loop repeat 35 89 IPR006603 -
Pvu1g1131 392 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 7 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1131 Pvu-Chr1 29429149 29436255 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1131 K23678 - gmx:100776511 620.928