Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1127 ATGTCCAAGATTCGAGGATTCAACCTCAGGAAACGGCTGATCCGGGTCTCCAAATGGGTCTTCAGGAAGATTCGGGTGCGTAGCCCACCCGGATACCATCGCTTGGGCAACTCTTCTAGGTTACCCATCGCGAAACTCCTCTCGTGGGGTCGCAAGCTGACGGCCGGCGCCAAGTCCTTCTTGACAGTTTCATTCGGCTCGGGTTACGCCCAGTTAAGATCCGATTCCGCGCTAGGATCCGACCGGGATCCGAGTGTGCCCAAGGGACATCTGGCCGTGTACGTGGGGCAAAAGGATGGCGAGTTGCACCGCGTGCTGCTGCCGGTAATATACTTCAACCATCCTTTGTTTGGGGAGTTGCTGAAGGAGGCAGAGGAGGAGTTCGGGTTCCACCACGACGGGGGAATCACCATCCCCTGCCGGTTCACGGAGTTTGAACGGGTCAAGACCCGAATAGCATCCGGGTCTCGCCGGAGCAGCCGTCCAAAAAGGTTGGCCTGA 501 0.5788 MSKIRGFNLRKRLIRVSKWVFRKIRVRSPPGYHRLGNSSRLPIAKLLSWGRKLTAGAKSFLTVSFGSGYAQLRSDSALGSDRDPSVPKGHLAVYVGQKDGELHRVLLPVIYFNHPLFGELLKEAEEEFGFHHDGGITIPCRFTEFERVKTRIASGSRRSSRPKRLA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1127 166 Pfam Auxin responsive protein 73 149 IPR003676 GO:0009733
Pvu1g1127 166 PANTHER SMALL AUXIN-UP RNA-RELATED 1 160 - -
Pvu1g1127 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 160 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1127 Pvu-Chr1 29183134 29183634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1127 84 145 Calmodulin-binding Proteins AT3G43120 53.226 1.14e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1127 K14488 - gmx:100783436 270.011