Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1126 ATGAACGGCTCTCGCTCTCGTTCCCGCCCCGAGTATATCCCGGGCCACATTCCGGACCCTTCCTACGTCCGCATTTTGGACACCACCCTCCGCGACGGCGAGCAGGCCCCCGGCGCCGCCATGACGGCCGAGCAGAAGCTGCGGATAGCGCGGCAGCTGGCGAAGCTGGGGGTGGACGTGATCGAGGCAGGGTTCCCTTGTGCATCACAGGAGGACTTCAATGGCGTGAAGATGATAGCGCAGGAAGTTGGGAGGAAGTGCGAGGATGATGGGTACGTTCCGGTGATTGTTGCGATGTGCAGGTGCAATGAGAAGGACATTAGGACTGCATGGGAGGCTGTGAAGGAGGCGAAGAGGCCGAGGCTTTTGCCCTTCATCGCCACCAGCCCCATTCACATGGAGTACAAGCTTCGAAAGACCAAAGAAGAGGTTCTTCAAATAGCTCGCACCATGGTCGCTTTCGCTCGCAGTTTGGGTTGTCCTGACATCCAATTCGGTGCTGAGGATGCAGCCAGGTTCCTCTCTTCTCTTTCCTCTTACATGCATTTATCATCAAACTTCGTTCTATAA 570 0.5649 MNGSRSRSRPEYIPGHIPDPSYVRILDTTLRDGEQAPGAAMTAEQKLRIARQLAKLGVDVIEAGFPCASQEDFNGVKMIAQEVGRKCEDDGYVPVIVAMCRCNEKDIRTAWEAVKEAKRPRLLPFIATSPIHMEYKLRKTKEEVLQIARTMVAFARSLGCPDIQFGAEDAARFLSSLSSYMHLSSNFVL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1126 189 Pfam HMGL-like 23 172 IPR000891 GO:0003824
Pvu1g1126 189 PANTHER 2-ISOPROPYLMALATE SYNTHASE-RELATED 3 172 - -
Pvu1g1126 189 SUPERFAMILY Aldolase 20 171 - -
Pvu1g1126 189 PANTHER HOMOCITRATE SYNTHASE-RELATED 3 172 - -
Pvu1g1126 189 ProSitePatterns Alpha-isopropylmalate and homocitrate synthases signature 1. 30 46 IPR002034 GO:0019752|GO:0046912
Pvu1g1126 189 Gene3D Aldolase class I 12 181 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1126 Pvu-Chr1 28780814 28781406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1126 K01649 - gmx:100797422 282.337