Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1124 ATGCATAGTAGATTGGTGGAGATGGGAGCAGAGGTAAATGAGAATCTTTTGCATGAGCGAAAGAAGAATTGTTTGGAAGAGGAAGAGTCAGTGGGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGCCCTGCCATATTCACAAGGTTTTCAACTTTTGGGATTGTGGTGGTTAGTCAATCCTTCATTGGCCATATTGGCTCAACTGAACTAGCTGCATATGCCCTTGTTATGACTGTCCTAGTCAGGTTTGCAAATGGGTTATTGATTGGCATGGCAAGTGCTTTGGAAACTCTTTGTGGTCAAGCATATGGGGCCAGAAAGTATGACATGCTTGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCACAACCTCTATACTCCTTCTTCCGGTTTACATCTTCACCACCCCTTTGTTAGAGGCTCTAGGCCAAGACAAAACCATTGCTCGAGTTGCTGGAACCATTTCTCTCTGGTCAATTGGTATCATGTTTTCTGTCTCAGTGTCATTCACCTGCCAAATGTTCCTGCAATCACAGAGCAAGAACAAGATCATTGTCTACCTTGCAGCAGCTTCAATTTCACTCCATGTTTTCCTGTCATGGCTTTTAACTGTTCAGCTCAAGTTTGGGCTCAACGGTGCACTCACATCAACGCTTTTCGCATATTGGATTCCAAACTTGGGCCAGCTTGTGTTTATCATGACCAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTCTGGTCTGTTGTCAAGCTTTCCCTCTCTTCTGGTGCTATGTTATGTCTTGAGATCTGGTACAACACAGTTTTGATTCTTCTTACAGGCAACATGGAAAATGCAGAAGTGTCCATTGATGCTCTGGCCATATGCCTCAACATCAATGGATGGGAAATGATGATAGCTCTTGGTTTCTTTGCTGCTGCAGGTGTCCGGGTTGCAAATGAGCTTGGAAGAGGGAGTTCAAAGGCTGCAAAATTTTCCATTCTGATAACAGTTCTGACATCATTTGTGATTGGATTGGTGCTATTTTTGGTGTTTCTGTTTCTGAGGGAAAGACTTGCGTATATTTTCACTACAGACTCTGAGGTGGCTAAAGCAGTTGCTGATTTATCACCATTGCTCTCATTTTCCATCTTGTTGAACAGTGTCCAACCTGTGCTCTCTGGAGTTTCTGTGGGAGCTGGGTGGCAAAGCATTGTAGCATATGTAAACATTGCCTCTTATTATCTCATTGGTATTCCTGTTGGACTGCTGCTTAATAATCTTCTCCATTTGGATGTCAAGGGTATTTGGATTGGAATGATGTTTGGAACATTTGTTCAGACTATTATGCTTATTACAATCACATTGAAAACGGATTGGGACAAGCAGGTAGAGCTAGCTCGAAATCGTGTTAACAAATGGACATTGGTGGAGAACGAAGAATCAAACACTATACCAAGCATATCTAGCTAA 1491 0.4272 MHSRLVEMGAEVNENLLHERKKNCLEEEESVGKRVWEESKKMWVVAGPAIFTRFSTFGIVVVSQSFIGHIGSTELAAYALVMTVLVRFANGLLIGMASALETLCGQAYGARKYDMLGVYLQRSWIVLFTTSILLLPVYIFTTPLLEALGQDKTIARVAGTISLWSIGIMFSVSVSFTCQMFLQSQSKNKIIVYLAAASISLHVFLSWLLTVQLKFGLNGALTSTLFAYWIPNLGQLVFIMTKCPDTWKGFSFLAFKDLWSVVKLSLSSGAMLCLEIWYNTVLILLTGNMENAEVSIDALAICLNINGWEMMIALGFFAAAGVRVANELGRGSSKAAKFSILITVLTSFVIGLVLFLVFLFLRERLAYIFTTDSEVAKAVADLSPLLSFSILLNSVQPVLSGVSVGAGWQSIVAYVNIASYYLIGIPVGLLLNNLLHLDVKGIWIGMMFGTFVQTIMLITITLKTDWDKQVELARNRVNKWTLVENEESNTIPSISS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1124 496 PANTHER MULTIDRUG RESISTANCE PROTEIN 26 482 - -
Pvu1g1124 496 PANTHER PROTEIN DETOXIFICATION 26 482 - -
Pvu1g1124 496 TIGRFAM matE: MATE efflux family protein 48 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1124 496 CDD MATE_eukaryotic 38 471 IPR045069 GO:0042910|GO:1990961
Pvu1g1124 496 Pfam MatE 270 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1124 496 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1124 Pvu-Chr1 28149519 28153854 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1124 K03327 - gmx:100775619 790.801