Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1121 ATGAAATTGAAGAGTGAGAGCAGGTTTATGAGCCTTTGGGTTGTGGTATCTGTGGCACTTTGTTTGAATATTGGAAAGTCAGTATCAGGTTCAAAGAAGTGCCATTTCCCTGCCATCTTCAACTTTGGTGACTCCAATTCTGACACTGGAGGCCTCTCTGCAGCCTTTGGACAACCTGGCCCTCCCCAGGGAGACTCCTACTTCCATCACCCTGCTGGCCGTTACTGTGATGGCCGTCTCATTGTTGATTTCATAGCTAAGAAGCTGGGCAAGCCTTATTTGAATGCATTTCTTGATTCTGTGGGGTCAAATTATAGCCATGGAGCCAACTTTGCAACTGCTGGATCCACCATTAGACCTCAGAACACAACCCTTCATCAAACTGGAGGGTTCAGCCCTTTCTCTTTGGACGTTCAATTCAATCAATTCAGTGATTTCCAACGCAGAAGCCAATTTTTTCGCAACAAAGGTGGAGTATATAAAACATTGTTACCAAAAGCAGAAGACTTTTCTCAAGCATTATACACGTTTGATATTGGTCAAAATGACTTGACATCCGGTTACTTCCACAACATGTCCACGGATCAAGTTAAAGCATATGTTCCAGATGTTTTGGATCAATTCAAGAACGTAATCAAGTATGTATATAATCATGGAGGAAGGTCATTTTGGGTTCACAATACGGGTCCGGTTGGTTGTTTGCCATACATAATGGATCTTCACCCAGTAAAACCATCATTAGTGGACAAAGCAGGATGTTCAACCCCTTACAATGAAGTGGCCAAGTTCTTCAATCGTGAATTGAAAGAGGTTGTGGTTAAACTCAGAAAAGAGCTTCCCTTGGCTGCCATCACTTATGTTGATGTTTACGCTGTGAAGTACTCTCTCATTAGTCATCCAAAGAAGCATGGGTTTGAGGAACCACTGAGGGCATGTTGTGGACATGGTGGAAAGTACAACTACAATTTGCACACTGGATGTGGTGCTAAGATTAAGATTCGTGGGAAAGAGATTCTGGTGGGGAAGCCATGCAAGGATCCATCTGTTTGGGTAAATTGGGATGGTGTTCATTACACTCAGGCTGCAAACAAATGGGTGCTAGAACAGATTGTTGATGGTGCATTTTCTGATCCACCTATTCCTTTGAACATGGCTTGTCATAAGCATCTTTGA 1173 0.4297 MKLKSESRFMSLWVVVSVALCLNIGKSVSGSKKCHFPAIFNFGDSNSDTGGLSAAFGQPGPPQGDSYFHHPAGRYCDGRLIVDFIAKKLGKPYLNAFLDSVGSNYSHGANFATAGSTIRPQNTTLHQTGGFSPFSLDVQFNQFSDFQRRSQFFRNKGGVYKTLLPKAEDFSQALYTFDIGQNDLTSGYFHNMSTDQVKAYVPDVLDQFKNVIKYVYNHGGRSFWVHNTGPVGCLPYIMDLHPVKPSLVDKAGCSTPYNEVAKFFNRELKEVVVKLRKELPLAAITYVDVYAVKYSLISHPKKHGFEEPLRACCGHGGKYNYNLHTGCGAKIKIRGKEILVGKPCKDPSVWVNWDGVHYTQAANKWVLEQIVDGAFSDPPIPLNMACHKHL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1121 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 34 388 - -
Pvu1g1121 390 Gene3D SGNH hydrolase 26 374 IPR036514 -
Pvu1g1121 390 Pfam GDSL-like Lipase/Acylhydrolase 39 370 IPR001087 GO:0016788
Pvu1g1121 390 SUPERFAMILY SGNH hydrolase 41 371 - -
Pvu1g1121 390 CDD SGNH_plant_lipase_like 37 373 IPR035669 -
Pvu1g1121 390 PANTHER BNAA06G32900D PROTEIN 34 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1121 Pvu-Chr1 27962763 27968251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1121 37 389 Acyl Lipid Metabolism Gene Families AT4G10950 28.962 1.12e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1121 - - vun:114175123 730.324