Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1115 ATGGTTGAGAGAACCGTGCCTGGCTCTGCCATCAAGGTTGTTTCAAAGAAGACCTTGTGTTTTTTCTTTGCAATGACAACGTTGTTGTTCATGTTGTCGTGGTTGTTTGTTCTGCGTTCCACGCGCCCGGATGCCACGTCTAACTCCAGCCTTTTCTCTTCCTCCAACGACGCATATTCTGATCCAGTGCAGCAAAAAAATGAAGAAGTAGAAACTTCGTTTGGTAATAGAGCAATACTCGGTGACAGTATACAAGCAGCAGCAACGACGACAGCAACACATGATGGGGCACAACAACAATTACAACAATACGTGCCGGAAGAACAAGATGTGAAATGCAAACCAAGTATGCTGAGAGTTTTCATGTATGATTTGCCTCCTGAGTTCCATTTTGGACTATTGGATTGGAAGCCTCAAGAGAATGCTAACGGTGTTTGGCCTGATATCAAAGCTGTATCACCCCATTACCCTGGAGGGTTGAATTTGCAGCATAGTATAGAGTATTGGCTAACTATGGATCTTCTTGCTTCAGAACTACCTGAAGCTGAAGCACCATCTAAAGCAAAGAGTGTGATGAGAGTTAGAAACTCTAGTGAAGCGGATGTAATATTTGTGCCATTTTTTTCCTCTCTTTGTTATAATCGGTTTTCTAAAACTGGCCCACATGAGAAGAGAAGCAGGAACAAGGTGCTGCAGGAAAAGTTGGTGAATTATGTTACAGCACAAGAGGAATGGAAGAGGTCAGGGGGGAAGGACCATGTCATCTTGGCTCACCATCCAAATAGTATGTTAGATGCAAGAACTAAGTTGTGGCCAGGAACTTTCATACTCTCAGATTTTGGGAGGTATCCTCCCAATGTAGCCAATGTTGAGAAAGATGTGATTGCACCTTACAAACATGTGGTTGGATCCTATGATAATGATCAATCCAGTTTTGATAGCCGTCCAATATTGCTGTACTTCCAAGGAGCTATATACAGAAAAGATGGAGGTCATGTTCGGCATGAGCTATACTATCTTCTGAAAAGCGAAAAGGATGTGCATTTTTCATTTGGGAGTGTTCAAAAGGGTGGAGTGAAAAAAGCCACAGAAGGCATGCGTTCTTCCAAGTTCTGCCTGAACATAGCTGGAGACACCCCTTCATCAAACCGCTTGTTTGATGCCATAGCCAGTCACTGTGTCCCTGTGATCATCAGTGACGAAATCGAGCTGCCATACGAGGATGTCCTTGACTACTCTGAGTTCTGCATATTTGTGCGCACCAGAGACGCCCTGAAAAAGAGGTATCTGATAAACTTCATGAGGAGCATTGGGGAGGAAGAATGGACCAAGATGTGGAACAGGTTGAAAGAGGTTGAGAGTTTCTTTGAGTTTCAGTTCCCTTCCAAGGAGGGTGATGCTGTCCAAATGATTTGGCAGGCTGTGAAACGCAAGGTTCCTTTCATGAAGTTGAAAACTAACAGGTCTAGAAGGTTTTTCAGATCAATACCTGCAGCAGCTAAATACAAATAA 1512 0.4352 MVERTVPGSAIKVVSKKTLCFFFAMTTLLFMLSWLFVLRSTRPDATSNSSLFSSSNDAYSDPVQQKNEEVETSFGNRAILGDSIQAAATTTATHDGAQQQLQQYVPEEQDVKCKPSMLRVFMYDLPPEFHFGLLDWKPQENANGVWPDIKAVSPHYPGGLNLQHSIEYWLTMDLLASELPEAEAPSKAKSVMRVRNSSEADVIFVPFFSSLCYNRFSKTGPHEKRSRNKVLQEKLVNYVTAQEEWKRSGGKDHVILAHHPNSMLDARTKLWPGTFILSDFGRYPPNVANVEKDVIAPYKHVVGSYDNDQSSFDSRPILLYFQGAIYRKDGGHVRHELYYLLKSEKDVHFSFGSVQKGGVKKATEGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSEFCIFVRTRDALKKRYLINFMRSIGEEEWTKMWNRLKEVESFFEFQFPSKEGDAVQMIWQAVKRKVPFMKLKTNRSRRFFRSIPAAAKYK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1115 503 PANTHER EXOSTOSIN FAMILY PROTEIN 8 493 - -
Pvu1g1115 503 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 8 493 IPR004263 GO:0006486|GO:0016757
Pvu1g1115 503 Pfam Exostosin family 116 429 IPR040911 -
Pvu1g1115 503 MobiDBLite consensus disorder prediction 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1115 Pvu-Chr1 27842425 27845517 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1115 - K22846 gmx:100816974 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1115 1 27842425 27845517 Pvu1g1115 1 27842425 27845517 ECH
Pvu1g1115 1 27842425 27845517 Pvu4g0796 4 11806891 11809785 PCT