Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1113 ATGTCTCTGTCACCAAAGTGGTTGACCAATGGTGTTGAAGCACTCATCTCAATTCTATGTTGTGCTATTTTCCTCATGTTTGATCTTCTTGATTCTGTTTTCTGCGTTATCTATGGATATCTTGATAAACTCGTTGAAGGGGAGGCTTCCCCTTGTTGCTGCTCTAACTGGGAGAGGCAAAAGAGGAGGATGAACGTGACAGATGATGGTCTATCAGATAGCTTGTATGAGAGGAAGAACATTTTCAGAGAAATGGGGTTCCTTCAATATGAGAGAAAACGAGATGATTCCAATAGAAATTTTGATAAAGGTAGTGGAAGGTCAGTGAATCGTTGGTCTGATTGTGGCTGTGAGTCTTGCCTTTCGTGGGTCAATGATGGAAGTGACTATAAGCTTCATTTTGTTGTGAAGGAACCCTTGTTGGCCAGTGGTGAGAACTTAAGGGGAAAACCTTCTGAGAATGTCATATTCTTGCATGGATTTCTCTGCTCTTCCTCATTTTGGACAAAGACAGTGTTTCCTTGTTTTTCTGAAAATGCGAATCACAAGTACAGATTGATTGCCATTGACCTGTTGGGATTTGGCAAGAGTCCAAAGCCTAGAGATTGCTCATACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCTGTGGTTTTACCATTGGAGTTGAGTAGCTTTCATATGGTTGCACACTCCATGGGTTGCATAATTGCATTGGCCTTGGCTGCTAAGTACCCCAAGTATGTAAAATCAATCACCCTCGTTGCTCCTCCATACACTTCTTCTGAGGGCAATGATGCTTGTTTAAATGCACTATCAATGCTTGCTGGAAAGACATTGCAGTCCCCATTGTCGTTTTGTTCTTCATTTATGTCCTGGTATGAGCATTTGGGCCGTACTGTTTGCCTTGTCTATTGCAGAAATCACCGAATATGGGAGACCATTCTAAAATTCATTACTCGCAAGAGGGATCTTCATTTCTTGACCACAGACATGACCAGGCACACCCATCATTCAGCTTGGAGTTCCATGCATAATGTGCTATGTGGAGGAGCAAAATTTGTGGACAGTTACCTTATAATTTTGACTAAAGTTGGAGTGAGAATAAATGTGATTCAAGGAGAAAAAGATGAAGTTGTCCCAGTGAAGTGTTTTAATAAGTTCAAGTTGAAGGCTCCTAATGCTGAAATTAACATCATTCCAAATGCAGATCATGGCACTGTACTATTTGGAAGGGAGAAGGAATTTGCAATTAGTCTACAGCATATATGGGACTCTTGTTGTTGA 1290 0.4085 MSLSPKWLTNGVEALISILCCAIFLMFDLLDSVFCVIYGYLDKLVEGEASPCCCSNWERQKRRMNVTDDGLSDSLYERKNIFREMGFLQYERKRDDSNRNFDKGSGRSVNRWSDCGCESCLSWVNDGSDYKLHFVVKEPLLASGENLRGKPSENVIFLHGFLCSSSFWTKTVFPCFSENANHKYRLIAIDLLGFGKSPKPRDCSYTLKDHVEMIEKSVVLPLELSSFHMVAHSMGCIIALALAAKYPKYVKSITLVAPPYTSSEGNDACLNALSMLAGKTLQSPLSFCSSFMSWYEHLGRTVCLVYCRNHRIWETILKFITRKRDLHFLTTDMTRHTHHSAWSSMHNVLCGGAKFVDSYLIILTKVGVRINVIQGEKDEVVPVKCFNKFKLKAPNAEINIIPNADHGTVLFGREKEFAISLQHIWDSCC* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1113 429 Gene3D alpha/beta hydrolase 123 427 IPR029058 -
Pvu1g1113 429 PANTHER HYDROLASE 26 428 - -
Pvu1g1113 429 PRINTS Alpha/beta hydrolase fold signature 183 198 IPR000073 -
Pvu1g1113 429 PRINTS Alpha/beta hydrolase fold signature 229 242 IPR000073 -
Pvu1g1113 429 PRINTS Alpha/beta hydrolase fold signature 243 256 IPR000073 -
Pvu1g1113 429 Pfam alpha/beta hydrolase fold 155 260 IPR000073 -
Pvu1g1113 429 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 26 428 - -
Pvu1g1113 429 SUPERFAMILY alpha/beta-Hydrolases 132 410 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1113 Pvu-Chr1 27737803 27740117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1113 5 428 Acyl Lipid Metabolism Gene Families AT5G17780 47.775 9.98e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1113 - - gmx:100775258 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1113 1 27737803 27740117 Pvu1g1113 1 27737803 27740117 ECH