Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1111 ATGGCCTCAACGTTGGTTTTGCAGAGAAGGCTGTTCAGGCTTTTGCAACTGTTACCGCCTTCTTCATCTTCTTCCATTCATGCGGTCCCATTCCTTTCTGTACAAGCTTCAGAATGCACGTCTCTCTGCAGGAAAAATAGCCTTCTTCCTCCTTTCCCATCTTATTCCAGAAACTTGTGCTCTGGCAGTTTTAATCTTGATGAATCTCAAGCCCCCCTGACTATTGATTACCGTTCTCTACTGGATGAGGGTGAATTCCACAGACTGGCTGATTCCACAATACATAGCGTACAAGAGAAATTAGAGGACTATGGAGACTTAGTTGAAGTTGATGGATTTGACATAGACTATGGGAATGATGTTTTGACTGTAAAACTTGGCGATCTTGGGACCTATGTATTGAACAAACAAACACCAAATCGACAACTTTGGCTGTCTTCTCCACTGAGTGGTCCGTCAAGGTTTGATTGGGATGGGGATGCTGAAGCTTGGATTTATAGACGGAAGAAAGCAAACTTGTATAAACTTTTGGAAGGCGAGTTGGAGCAGTTATGTGGCAAAACTTTAGTTCTTTCCTGA 579 0.4301 MASTLVLQRRLFRLLQLLPPSSSSSIHAVPFLSVQASECTSLCRKNSLLPPFPSYSRNLCSGSFNLDESQAPLTIDYRSLLDEGEFHRLADSTIHSVQEKLEDYGDLVEVDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQLWLSSPLSGPSRFDWDGDAEAWIYRRKKANLYKLLEGELEQLCGKTLVLS* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1111 192 PANTHER FRATAXIN 22 190 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 TIGRFAM mito_frataxin: frataxin 85 182 IPR017789 GO:0004322|GO:0005739
Pvu1g1111 192 SMART Frataxin_Cyay_2 81 192 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 ProSitePatterns Frataxin family signature. 133 147 IPR020895 -
Pvu1g1111 192 Gene3D Frataxin/CyaY 74 192 IPR036524 GO:0008199|GO:0016226
Pvu1g1111 192 SUPERFAMILY Frataxin/Nqo15-like 72 188 IPR036524 GO:0008199|GO:0016226
Pvu1g1111 192 PRINTS Frataxin signature 81 99 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 PRINTS Frataxin signature 119 134 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 PRINTS Frataxin signature 134 149 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 TIGRFAM FeS_CyaY: iron donor protein CyaY 83 190 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 CDD Frataxin 81 189 - -
Pvu1g1111 192 Pfam Frataxin-like domain 81 188 IPR002908 GO:0008199|GO:0016226
Pvu1g1111 192 ProSiteProfiles Frataxin family profile. 81 189 IPR002908 GO:0008199|GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1111 K19054 - gmx:100815916 282.337