Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1098 ATGGCCATGTTGAACAATTCTAATACCACCACACCATCACAGATCATACAAATCCAAGCACAACTTCCACAGCAAAGGCTTCCATTCACAGTCCTCAACAAGGCCCAAGTTCCAAACTTTTCCAATAGAACAATAGTGGCGGGTCAAGCAGCAAGAACGGTTTTCCAGATTCTCTTCTACTTGTATTTATTCTTGGTTGCAGTCTTGGTGATTTTCCTGATCATATATGGTTTTGTCTCGGACGCTCACACGCACCATTTCCACCCTCAGAAATGGTACGCCCCACTTCTAGTTTCAACAGCATCTGCTGGAATTGTTGGTTTCACATGGCAATACATCACTGCACGCCACTCCACAAGGGTAGTCAGGTTAGCATTTTGGCTGAGTCCCTTGCTAACATTCGCAATGGGAATTATGTTTATATGCATTGGTACTGCAGTGAGTCTGGCAGTTGGTGTAATTGCTTTGGTTTCTGCATTAATCCAATCCCTCTATAGTTGTTGGGCCAGTCCCAGATTTGAATATGCCACCAAAATCTTGTCAGTTTCAATAGCATTTCCTCCTAACAAAACCCAGGGGCTAACTCTTTATTCAATCCTCATTGGCATCCTTTACTGCTGTTTCCTGGTGGCTGGGATTGGAGGAGCAAGAGCCATTGAAAACAGAACCAAACTATCAGCCTTTTTCATCTTCTTGATCTTGCTGAGCCTAGGATGGACTATGCAGTTTCTGAAGAATGCAATGTATGTTACTATTTCAAGGGTCAAGTATATGCATTTTTCTGGAGGAGTTGACATGGACACTAGAGTTGCATTTTGTGACACAATCAAGCACTTAACTGGAAGTGTTTCCATAGGCTCCATCTTGGTTCCCATCATCGTGCTCTTCCGGGGTTTTGCACGAACCACAAGTCTGGTTGGAGGAGATACAGATGAGTTCATGTTTTCCTGTGTCAGTTGCTATATGGGGATTGCATCTCTTCTTGTGCTCCGTGGGAACCGATGGGGTTTTGTGCACGTTGGAGTTTATAACAAAGGGTTTGTGCAGGCATCTTCTGATACTTGGGACATGTTCATTAGAGTTGGATTGAAGGAACTCATAGACTTGGATCTCACTGGGGTATTCTGTTTCCTTAGTGGGGTTGGCACAGGTGCAATATGTAGTCTAGTGAGTGGAATTTGGAGTCTTGTAATGCACAAGAGCTATGCCACAGAAGTGTCCATTTATGCTTTCCTCATTGGCTATTTCATGTGTCGATTGGCCATATCATGGGCACAAGCTTGTGTTGCAGCTTACTATGTTGCCTACGCAGAAAATCCACAGAGCACTCATTTTGACTCCACTATTCCAGTACGCTTGGAGCAGCTTAACAGATCTCAAGCTCTGCAAATATTCAGAGCTAATAATTTCAGCCGAGGCTAA 1422 0.4381 MAMLNNSNTTTPSQIIQIQAQLPQQRLPFTVLNKAQVPNFSNRTIVAGQAARTVFQILFYLYLFLVAVLVIFLIIYGFVSDAHTHHFHPQKWYAPLLVSTASAGIVGFTWQYITARHSTRVVRLAFWLSPLLTFAMGIMFICIGTAVSLAVGVIALVSALIQSLYSCWASPRFEYATKILSVSIAFPPNKTQGLTLYSILIGILYCCFLVAGIGGARAIENRTKLSAFFIFLILLSLGWTMQFLKNAMYVTISRVKYMHFSGGVDMDTRVAFCDTIKHLTGSVSIGSILVPIIVLFRGFARTTSLVGGDTDEFMFSCVSCYMGIASLLVLRGNRWGFVHVGVYNKGFVQASSDTWDMFIRVGLKELIDLDLTGVFCFLSGVGTGAICSLVSGIWSLVMHKSYATEVSIYAFLIGYFMCRLAISWAQACVAAYYVAYAENPQSTHFDSTIPVRLEQLNRSQALQIFRANNFSRG* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1098 473 Pfam Plasma-membrane choline transporter 153 440 IPR007603 GO:0022857|GO:0055085
Pvu1g1098 473 PANTHER F20H23.27 PROTEIN-RELATED 15 460 - -
Pvu1g1098 473 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 15 460 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1098 Pvu-Chr1 26793560 26795924 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1098 - - gmx:100787553 790.415