Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1090 ATGGGAGCCCAATCCATCTTCAACACTTATTGCACTACCTGTCACCAATACAAAATAAATTTTCAGTTTGGAACCAAAGTAACCTGTGTTGGTAATGATTTGGTTTTATGTGCAATACCTCAGTACACCCTAATGTTTGTGTTAAGGGCCCCTGGTTTTGATACTGACTACTTAGTCGCTAATATTTTGTACCATAACGAGTCCAAAATATGTTTTCTTACAATTGTAATTTTAATTTACAACAGTTATCGCATGGAGTGTAGTTTATTTGGTAACTATTGTAATGAGCTCAATGCATTTCTGTCATGTGGAGAGTTGCAAAATATTGTCATCAGTGTGCAGTTTGCTAAAGTAAAGATTTTCCAGGAAAAGGTTTGTCTACAAAATTGCTTGGATTGTACGAAAATAATATATAACATACAGTCTAAAGACGCAATCGAACTCAAGAAAAGGATGATTGAAAGTACAAATTCTCCTACACAGGGACTCAGTCAATTGTGTGATTCTGGAAAACAGAATGTTGAGGATGAATTCATCAGCTTCATTCATAGAAATACTATTCAAGGCCTGAAAGATTCTACAATAAAACATATTGTAGCTAATGACGATTGGTGGTACACGGCTTGCTTATGCGGTAAAGTTGTTTACCCAGATTCCAAAATGTTTTTTTGTGAGAAATGTAACAAACATGTTATTAAAGTCCAACAAAGGTATAAGCTGAAGGTGCGAGTAATTGATAAAACGGATTCCACTACTTTCATTCTATTTGACAGGGATGCCACTACTCTAATCAATAAATCTTGCGCTGAATTATTTGAAAGTCATGATAAGAACGGTGATTCTGGTGTACTACCAAAAGAATTTGATCTTTTGATTGATAAAGTTGTGTTGTTTAAAGTTGGTTGTGTTAAAGATCAATCTCTTAGGTTTGACCAATCATTCCGTGTCAAAAAAGTGTGTATTGATGATACTACTATACAAAGGTTTTGTGATGGTCGTGTGGAAAATGTGGATTTATTTAATAAATTTTCCAATGAAGTTGTTGATTTGCAATCTAAAACTGTTGGTTTAGGCAGTGATAATCTCTTAGCTACTGCTCCTGAAGTGGTTGCTCCACGAGTTACAAGAGATTTTGCTTCACCTACGCACACACCCGATGATGATATCTCACTAAGGATATTAAGGAAAAATATCAAATTCAAAAAGGGAGTAGTATAA 1218 0.3465 MGAQSIFNTYCTTCHQYKINFQFGTKVTCVGNDLVLCAIPQYTLMFVLRAPGFDTDYLVANILYHNESKICFLTIVILIYNSYRMECSLFGNYCNELNAFLSCGELQNIVISVQFAKVKIFQEKVCLQNCLDCTKIIYNIQSKDAIELKKRMIESTNSPTQGLSQLCDSGKQNVEDEFISFIHRNTIQGLKDSTIKHIVANDDWWYTACLCGKVVYPDSKMFFCEKCNKHVIKVQQRYKLKVRVIDKTDSTTFILFDRDATTLINKSCAELFESHDKNGDSGVLPKEFDLLIDKVVLFKVGCVKDQSLRFDQSFRVKKVCIDDTTIQRFCDGRVENVDLFNKFSNEVVDLQSKTVGLGSDNLLATAPEVVAPRVTRDFASPTHTPDDDISLRILRKNIKFKKGVV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1090 405 CDD RPA1_DBD_C 194 319 IPR013955 -
Pvu1g1090 405 Gene3D - 59 160 IPR012340 -
Pvu1g1090 405 Gene3D - 162 339 IPR012340 -
Pvu1g1090 405 Pfam Replication factor-A C terminal domain 197 299 IPR013955 -
Pvu1g1090 405 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 21 272 - -
Pvu1g1090 405 PANTHER REPLICATION FACTOR A 1, RFA1 21 272 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pvu1g1090 405 SUPERFAMILY Nucleic acid-binding proteins 186 307 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1090 Pvu-Chr1 26499392 26504480 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1090 - - pvu:PHAVU_001G105000g 827.78