Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1089 AATGGGCACATGGATTGTGCATTCGCCATCGAGTTTGAAAATGAATTGGGTGAGGAATGGATCCTCAGCAACTATCAAGGCAATATTCATATAGTATATTATAACAAAGATATACTTTGTCCCCAAATTTTCTATGGATGGTCCAGTCTGAGAGATTTTTATGGGTTTAAAGGTCACCAGAGTATATTGTTTCGTTACATGGGTAATAACACCTTCCATATAATTATTTATATGGGAGAGTTATGTGAAAGTGTTGATTTGCCTTCTCCTTTTGCTGAATATGTTCGTAGAGGGAAGTTCAAGAAGGTTACTCTACATGGATCGCTACAAGATGTGGAATACAACATTTTCAAGTCCAGGTTTCCTTCTAGAAGCATTACACTTGGTAGCGGGTGGAAACATTTTTGTCGTCTTCATTCTATCCGTGAAGATGACAAAATTATATTTGAATGTCATAACAAGAAGCCCTCTTCTAATATCAGAGTTCTACTACTGATGACGAGTCACTACAAAAGACTTAGTGTATAA 528 0.3655 NGHMDCAFAIEFENELGEEWILSNYQGNIHIVYYNKDILCPQIFYGWSSLRDFYGFKGHQSILFRYMGNNTFHIIIYMGELCESVDLPSPFAEYVRRGKFKKVTLHGSLQDVEYNIFKSRFPSRSITLGSGWKHFCRLHSIREDDKIIFECHNKKPSSNIRVLLLMTSHYKRLSV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1089 175 ProSiteProfiles B3 DNA-binding domain profile. 87 168 IPR003340 GO:0003677
Pvu1g1089 175 SUPERFAMILY DNA-binding pseudobarrel domain 86 154 IPR015300 -
Pvu1g1089 175 SUPERFAMILY DNA-binding pseudobarrel domain 7 83 IPR015300 -
Pvu1g1089 175 Gene3D - 80 167 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1089 Pvu-Chr1 26497214 26497931 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1089 - K05164 pvu:PHAVU_010G055000g 209.149