Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1087 ATGAACACAGGTGTTGGTTCAACAATTGGTGCAGGAGTGTATGTTCTAGTGGGAGCAGTTGCACGGGAGCATACTGGACCCGCTTTGGCCATTTCTTTTATGATTGCTGGATTAGCAGCTGCTCTTTCTGCCTTTTGCTATGCAGAGTTGGCTAGTCGATGCCCTTCTGCAGGAAGTGCATATCACTATTCATACATTTGTCTTGGAGAAGGTGTTGCTTGGTTGATTGGCTGGTCCTTAATATTAGAATATACAATTGGTAGTGCTGCTGTGGCTCGTGGCACAACCCTCAATTTGGCTGCACTTTTTGGTGGTAAGGAGAATTTACCAGTGTTCATAGCGCGTTACCATATTCCTGAAATAGATGTTGTTGTGGACCCATGTGCAGCAATCTTGGTATTACTTGTTACAGGACTCTTATGTCTGGGCATCAAGGAGAGTGCAGTGGTACAAGGAATAGTGACAACAGTGAATATATGTGCATTGCTTTTTGTCATAGTAGCTGGTGGTTACGTGGGATTCAAGTCTGGTTGGGTTGGATATGATCTTCCTATGGGACTTTTCCCCTTCGGGTTTGATGGGATACTAGCTGGTTCTGCCACAGTATTCTTTGCATATATAGGCTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTGAAAAATCCTCAGCGAGATTTACCTCTTGGTATTGGAGGTGCATTGTTTCTTTGCTCTGGGATATATATGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCGGATACCCCAATATCTTCTGCATTTGCTGAACAAGGAATGCACTGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCACTGTTGGGTGGGATACTTCCTCAGCCACGAATTTTGATGTCTATGGCAAGGGATGGACTGCTGCCACCTTTTTGTGCTGATATAAATAAGAAGACTCAGGTTCCTGTTAAGGGCACAATAGCTACTGGCATTGTGGCCGCAGGCTTGGCATTTTCTATGGAAGTCTCTGAACTGGCAGGGATGGTTAGTGTGGGTACACTTTTAGCATTTACCATGGTGGCAATGTCTGTGTTGATCCTAAGATATATCCCTCCAAATGAAGTCCCACTGCCTCCATCTCTCAAGGATTCAATTGCTTCAGTGTTGAAGCGGTGTAGTTTGAGCAGTTCAGATACAAATGTGGGAGATGTAGATGCTAATACTTCTGACCACAGAAAGCCTTTGATTGTTAAGGAGGATGTTTCAATTGATTTTACTAAACATTTTGCTGGAGGAAACCATATAGCAGAACCTGAAAGGCGAAAAGTTATTGGGTGGATCATATCATTCATATGCTTAGGGGCGTTTGTCCTTACATATGCAGCTTCAGATTTCACTGTTCTTAGTTCTGTTCGCTTTGCATTGTGTGGAGTTGGAGGTGCTATTCTTTTGTGTGGTTATGCTTTCCTAACCAGAATAGATCAGGATGATGCAAGACATAACTTTGGGCACACGGGAGGTTTTATTTGTCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTGCTACTTACTTGTTAATCTTGGATATGGTACATGGCTGCGTGTTTCTATATGGCTGGGAACAGGACTACTAGTTTATGTGTTTTATGGCCGAACTCATAGCTTTCTGAAAGATGCAATTTATGTGCCAGCAAAGCAAGTGGATGAAATTTACCAAACTTATAGAAGCTCTGTTTCTTAA 1761 0.4293 MNTGVGSTIGAGVYVLVGAVAREHTGPALAISFMIAGLAAALSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWSLILEYTIGSAAVARGTTLNLAALFGGKENLPVFIARYHIPEIDVVVDPCAAILVLLVTGLLCLGIKESAVVQGIVTTVNICALLFVIVAGGYVGFKSGWVGYDLPMGLFPFGFDGILAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFLCSGIYMMVSIVVVGLVPYYAIDPDTPISSAFAEQGMHWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFCADINKKTQVPVKGTIATGIVAAGLAFSMEVSELAGMVSVGTLLAFTMVAMSVLILRYIPPNEVPLPPSLKDSIASVLKRCSLSSSDTNVGDVDANTSDHRKPLIVKEDVSIDFTKHFAGGNHIAEPERRKVIGWIISFICLGAFVLTYAASDFTVLSSVRFALCGVGGAILLCGYAFLTRIDQDDARHNFGHTGGFICPFVPLLPIACILINCYLLVNLGYGTWLRVSIWLGTGLLVYVFYGRTHSFLKDAIYVPAKQVDEIYQTYRSSVS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1087 586 PANTHER PROTEIN, PUTATIVE-RELATED 1 577 - -
Pvu1g1087 586 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 1 577 - -
Pvu1g1087 586 PIRSF AA_transporter 433 573 - -
Pvu1g1087 586 PIRSF AA_transporter 2 381 - -
Pvu1g1087 586 Pfam Amino acid permease 5 377 IPR002293 GO:0016020|GO:0022857|GO:0055085
Pvu1g1087 586 Gene3D Amino acid/polyamine transporter I 1 392 - -
Pvu1g1087 586 Pfam C-terminus of AA_permease 511 561 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1087 Pvu-Chr1 26469663 26476257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1087 4 586 Organic Solute Cotransporters AT5G36940 63.870 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1087 K13863 - gmx:100784895 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1087 1 26469663 26476257 Pvu1g1087 1 26469663 26476257 ECH
Pvu1g1087 1 26469663 26476257 Pvu4g0786 4 11489970 11492882 PCT