Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1086 ATGATTGTGAGGGATGAAAATTCTGGTGTTGGTTTGGGGGGAGGAGGAAGGTGGTCTAGGGGTTTTGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCTGTTCACGCGAGAAGACATGGTCAATTGGCTAGGAAGTTATCTGCCATTGATCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCCAGAGAGCAAGCAGGACCAGCACTTGTGTTATCACTTTTCATTGCAGGAATAGCTGCTGGACTGTCAGCCTTTTGCTATGCAGAGCTTGCATGTAGGTGCCCATCTGCAGGCAGTGCTTATCATTATACATACATATGCATCGGAGAAGGGGTGGCTTGGTTGGTCGGTTGGTCTCTGATTCTAGAATATACAATTGGTGCTTCTGCTGTTGCTCGTGGCATAACTCCAAATCTGGCCTTGTTTTTTGGTGGAGAGGAAAACCTCCCTTTGTTTTTGGCTCGACACACGTTACCAGGTCTTGAAATTGTGGTTGATCCATGTGCAGCTGTATTGATTCTTCTTGTTACCTTACTCCTATGCCTTGGAATCAAGGAGAGTTCAATGGCACAATCTATTGTGACAACAGTAAATGTTGGTGTCATGCTTCTCATCATTTTAGTTGGTGGATATCTAGGTTTCAAGTCTGGATGGGTTGGATATGAACTCTCCAGCGGGTATTTTCCTTATGGAATGAATGGGATGTTTGCTGGGTCTGCAATAGTTTTCTTTTCATACATTGGTTTTGATTCCGTGACCAGCACAGCTGAGGAGGTGAAAAATCCTCAACAAGACCTGCCAATTGGCATATCAACTGCATTAACTATATGTTGCATTCTGTATATGCTTGTAGCTGCAGTTATTGTTGGTTTAGTACCATATTATGACTTGAACCCTGATACCCCAATTTCTTCAGCATTTTCTAGTTATGGGATGGAATGGGCAGTGTATATAATAACAACTGGAGCTGTTACTGCTCTTTTTTCCAGTCTGCTGGGTTCTGTTCTTCCTCAGCCACGTGTCTTTATGGCAATGGCTAGGGATGGTTTATTGCCTCCTTTCTTCTCGGACATCCATAAAAGCACACGGATTCCTTTGAAAAGTACCATTGTCACTGGTGTCTTTGCAGCTACTCTTGCATTCTTTATGGATGTTTCCCAATTAGCAGGAATGGTTAGCGTGGGAACATTGCTTGCATTTACCACAGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCACCTGATGAGGTACCCGTTCCATCTTCACTTCTAACATCTGTTGATCAATTATTGGGGCACTCTGGTGGTCATATTGCGGAAGATAGGGCCATAAGTGCTGTAGATTCGGCTAGTTATTGTGAGGATAGCCATCAACATGACAAGTCAGAGGCTCTTCTTAGACACCCTTTAATCATAAAAGAAGTTACCAAAGATGAACAGAATGAGAAATCTAGGCGAAAACTTGCTGCATGGACCATAGCCATTCTGTGTATAGGGGTTCTAATTGTTACCAGTGGGGCTTCAGCTGACTGGTGTCCCAGGATTTTGCGAATAACGGTTTGTGGAATAGGTGGTGTTCTTCTTTTGTGCAGTGTAATTGTACTGGCCTGCATAAAGCAAGATGATACAAGGCACAGCTTTGGATACTCAGGAGGTTTTGCTTGCCCATTTGTTCCATTCTTGCCTAGTGCATGTATTCTTATAAACACCTACTTACTAATTGGCCTTGGAGCTGCTACATGGCTACGAGTTTCTATATGGTTGCTAATAGGAGTACTCATATACTTGTTCTATGGCCGCACTCATAGCTCACTTTTACATGCAATCTATGTTCCCTCTGCGTATGCTGATGAAATCCATCGTTCTCAAGCAATTCATCTTGCCTAG 1923 0.4316 MIVRDENSGVGLGGGGRWSRGFGSLIRRKQVDSVHARRHGQLARKLSAIDLVGIGVGATIGAGVYILIGTVAREQAGPALVLSLFIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEENLPLFLARHTLPGLEIVVDPCAAVLILLVTLLLCLGIKESSMAQSIVTTVNVGVMLLIILVGGYLGFKSGWVGYELSSGYFPYGMNGMFAGSAIVFFSYIGFDSVTSTAEEVKNPQQDLPIGISTALTICCILYMLVAAVIVGLVPYYDLNPDTPISSAFSSYGMEWAVYIITTGAVTALFSSLLGSVLPQPRVFMAMARDGLLPPFFSDIHKSTRIPLKSTIVTGVFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPVPSSLLTSVDQLLGHSGGHIAEDRAISAVDSASYCEDSHQHDKSEALLRHPLIIKEVTKDEQNEKSRRKLAAWTIAILCIGVLIVTSGASADWCPRILRITVCGIGGVLLLCSVIVLACIKQDDTRHSFGYSGGFACPFVPFLPSACILINTYLLIGLGAATWLRVSIWLLIGVLIYLFYGRTHSSLLHAIYVPSAYADEIHRSQAIHLA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1086 640 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 19 633 - -
Pvu1g1086 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Pvu1g1086 640 PIRSF AA_transporter 490 624 - -
Pvu1g1086 640 PIRSF AA_transporter 23 434 - -
Pvu1g1086 640 Gene3D Amino acid/polyamine transporter I 42 440 - -
Pvu1g1086 640 Gene3D Amino acid/polyamine transporter I 482 624 - -
Pvu1g1086 640 Pfam Amino acid permease 47 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Pvu1g1086 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 19 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1086 Pvu-Chr1 26447699 26459755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1086 22 640 Organic Solute Cotransporters AT3G03720 64.148 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1086 K13863 - gmx:100816704 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1086 1 26447699 26459755 Pvu1g1086 1 26447699 26459755 ECH
Pvu1g1086 1 26447699 26459755 Pvu4g0785 4 11482170 11489421 PCT