Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1075 TTTGGTGCAAAAGAATATAGCATGATGGGAGTGTATCTTCAGAGATCATGGATAGTTTTGTTCTTAACTGCACTCTGTCTTCTTCCGGTGTTCTTCTTCACAAGCCCAATTTTAATGCTCTTAGGCCAAGATGAGAGCATAGCACAAGTGGCAGGAACCATTTCTGTTTGGTCAATTCCTATCGTGTTTGCTTTCATTGTCTCATTCACTTGTCAGACTTTCCTGCAATCTCAGAGCAAGAATGTCATCATTGCATTCTTGGCAGCATTTTCGATAGTGATTCATTTGTTTCTCTCCTGGCTTTTGACAATGAATTTCAAGCTGGGAATTCCTGGTGCAATGGTTTCAACAATTTTGGCATTCTGGATTCCCAACATTGGTCAACTCATATTTGTCACATGTGGTTGGTGCTCTGATACATGGAAAGGTTTCTCCTCTCTCGCATTCAAAGACCTCTGGCCTGTTGTCAAGATGTCTCTTTCAGCTGGTGCCATGCTATGTCTTGAGCTCTGGTACTACACCATACTGGTTCTTTTGACCGGTAACATGAAAAATGCAGAGGTTGCAATTGATGCTCTATCCATATGTCTCAACATCAATGGATGGGAAATGATGATAGCACTCGGTTTCATGGCTGCAGCAAGTGTTCGAGTAGCAAATGAACTTGGAAAAGGAAGTGCCAAAGCTGCAAAGTTCTCAATAGTTGTGTCTGTGCTCACATCATTGATCATCGGATTCTTTCTGTTCTTATTCTTCTTATTTTTCAGAGAAAGACTTGCTTACATATTCACCTCAGATAAAGACGTGGCCTTGGCTGTTGGGGATTTGTCACCTTTGTTATCAATCTCTATTTTACTAAACAGTGTTCAACCTGTACTCTCAGGAGTGGCTATAGGAGCAGGGTGGCAAAGCATTGTAGCTTATGTGAATCTGGGGTGTTATTACATCATAGGTATTCCTGTAGGTATTGTACTTGGTAATGTTCTCGACATGCAAGTCAAGGGAATCTGGATTGGAATGTTGTTTGGAACCTTCATTCAAACAATAGTGCTAACTGTAATCACATACAAAACTAATTGGGAGGAGCAGGTTACCATTGCTCAAAAGCGTATTAGCAGATGGGCGAAGGTGGACAGTGCTGATCAAGAAAATGAAACAGAGAGAAAATATGTTAGCTAA 1179 0.4097 FGAKEYSMMGVYLQRSWIVLFLTALCLLPVFFFTSPILMLLGQDESIAQVAGTISVWSIPIVFAFIVSFTCQTFLQSQSKNVIIAFLAAFSIVIHLFLSWLLTMNFKLGIPGAMVSTILAFWIPNIGQLIFVTCGWCSDTWKGFSSLAFKDLWPVVKMSLSAGAMLCLELWYYTILVLLTGNMKNAEVAIDALSICLNINGWEMMIALGFMAAASVRVANELGKGSAKAAKFSIVVSVLTSLIIGFFLFLFFLFFRERLAYIFTSDKDVALAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNLGCYYIIGIPVGIVLGNVLDMQVKGIWIGMLFGTFIQTIVLTVITYKTNWEEQVTIAQKRISRWAKVDSADQENETERKYVS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1075 392 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 375 - -
Pvu1g1075 392 TIGRFAM matE: MATE efflux family protein 2 337 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1075 392 PANTHER PROTEIN DETOXIFICATION 1 375 - -
Pvu1g1075 392 Pfam MatE 164 323 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1075 392 Pfam MatE 1 101 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1075 392 CDD MATE_eukaryotic 1 364 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1075 Pvu-Chr1 25639617 25641982 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1075 K03327 - gmx:100796360 685.256