Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1074 ATGAACGGCTCTCGCTCTCGTTCCCGCCCCGAGTATATCCTGGGCAACATTCCGGACCCTTCCTACATCCGCATTTTGGACACCACCCTTCGCGACGGCGAGCAGGCCCCCGGCGCCGCCATGACGGCCGAGCAGAAGCTGCAGATAGCGCGGCAGCTGGCGAAGCTGGGGGTGGACGTGATCGAGGCAGGGTTCCCTTGTGCATCACAGGAGGACTTCAATGGCGTGAAGATGATAGCGCAGGAAGTTGGGAGGAAGTGCGAGGATGATGGGTACGTTCCGGTGATTGTTGCGATGTGCAGGTGCAATGAGAAGGACATTAGGACTGCATGGGAGGCTGTGAAGGAGGCGAAGAGGCCGAGACTTTTGCCCTTCATCGCCACCAGCCCCATTCACATGGAGTACAAACTTCGAAAGACCAAAGAAGAGGTTCTTCAAATAGCTCGCACCATGGTTGCTTTCGCTCGCAGTTTGGGTTGTCGTGACATCCAATTTGGTGCTGAGGATGCAGCCAGATCAGATAGAGAGTTCCTTTATCAATTTTTTGGAGATGTTATCGAAGCTGGGGCAACAACTTTGGGCATAGGAGACACTGTGGGCATAACAATGCCATTCGAGTTTGGAAAACTGATTGCTGATATAAAAGCCAATACTCCTGGAATTGAAAAGGCTATTATTGCTGTTCACTGTCATAATGATCTTGGACATGCCACTGCAAACACAATAGAGGCTGCACGTGCTGGGGCAAGGCAACTAGAAGTAACAATTAATGGCATTGGTGAAAGGGCTGGTAATGCTGCATTAGAAGAGGTTAGAATCATTCATCTATATTTTAGACAACTTAATACATCTTATTTCACCAATTATAAAGCATTTGGAGATTAA 885 0.4927 MNGSRSRSRPEYILGNIPDPSYIRILDTTLRDGEQAPGAAMTAEQKLQIARQLAKLGVDVIEAGFPCASQEDFNGVKMIAQEVGRKCEDDGYVPVIVAMCRCNEKDIRTAWEAVKEAKRPRLLPFIATSPIHMEYKLRKTKEEVLQIARTMVAFARSLGCRDIQFGAEDAARSDREFLYQFFGDVIEAGATTLGIGDTVGITMPFEFGKLIADIKANTPGIEKAIIAVHCHNDLGHATANTIEAARAGARQLEVTINGIGERAGNAALEEVRIIHLYFRQLNTSYFTNYKAFGD* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1074 294 PANTHER 2-ISOPROPYLMALATE SYNTHASE-RELATED 3 273 - -
Pvu1g1074 294 CDD DRE_TIM_IPMS 25 290 - -
Pvu1g1074 294 PANTHER HOMOCITRATE SYNTHASE-RELATED 3 273 - -
Pvu1g1074 294 Gene3D Aldolase class I 16 291 IPR013785 -
Pvu1g1074 294 SUPERFAMILY Aldolase 20 276 - -
Pvu1g1074 294 Pfam HMGL-like 23 283 IPR000891 GO:0003824
Pvu1g1074 294 ProSiteProfiles Pyruvate carboxyltransferase domain. 23 291 IPR000891 GO:0003824
Pvu1g1074 294 ProSitePatterns Alpha-isopropylmalate and homocitrate synthases signature 1. 30 46 IPR002034 GO:0019752|GO:0046912
Pvu1g1074 294 ProSitePatterns Alpha-isopropylmalate and homocitrate synthases signature 2. 226 239 IPR002034 GO:0019752|GO:0046912
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1074 Pvu-Chr1 24847718 24855325 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1074 K01649 - gmx:100816439 429.869