Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1072 ATGGAGGGAGATCAAGAGGAGAAGTTGCTCATCAAAGAGAAAACATCAGAAGAGGAATCATCGTTGGTGAACAAGGTGTGGGAAGAGAGCAAGTTGATGTGGACAGTGGCAGCACCAGCCATATTCACTAGGTTTTCAAGCTTTGGTGTCACTATTATAAGCCAGGCTTATGTTGGTCATATTGGTTCAAGAGAACTCGCTGCTTTTGCTCTTGTTTTCACTGTTCTCATACGCTTTGCCAATGGTATTCTGTTAGGAATGGCGAGTGCATTGTCAACAATTTGTGGACAAGCATTCGGTGCAAAAGAATTTGATATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTCAACTGCTTTCTGTCTTCTTCCGTTGTTCTTATTCACGAGCCCAATTTTGAAGCTCCTGGGTCAAGATGAGAACATAGCAGAAGTGGCGGAAACCATTTCTCTTTGGTCAATTCCAATCTTATTTTCTTTTATTGTTTCCTTCACTACCCAAACGTTTCTGCAATCTCAAAGCAGGAATACCATCATTGCATTCTTGGCAGCTTTCTCATTAATCACTCATGTTTCACTCTCTTGGCTTTTGACAATGAATTTCAAGCTGGGAATTCCTGGTGCAATGCTTTCAACAATTTTGGCATCCTGGATTCCCAACATTGGTCAAGTAATATTTATCACCTGTGGTTGGTGCTCTGATACATGGAAAGGTTTATCATTTTTAGCATTCAAAGATCTTTGGCCTGTTGTCAAGCTTTCCCTTTCATCTGGGGTCATGTTATGTCTTGAGTTGTGGTACAACACAATATTGGTTCTTCTAACGGGCAACTTGAATGATGCAGAGGTCCAAATTGATGCTCTATCTATATGCCTCAATATTTCTGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGGAAAGGAAGCTCCAAAGCTGCAAAGTTCTCTATACTCGTGTCAGTGCTTACATCGTTAGCCATTGGATTCTTTCTCTTCTTATTTTTCTTACTCTTAAGGGAAAAGCTTGCATACATATTTACCTCAAATGAAGAAGTGGCCAATGCTGTTGCGGACTTGTCACCTTTGTTGGCAATCTCCATTCTCCTCAACAGTGTTCAACCTGTACTCTCAGGAGTGGCTATTGGAGCAGGGTGGCAAAGCTCTGTAGCATATGTGAACATAGGGTGTTATTATGTCATAGGTATTCCTGTTGGAATGGTGCTTGGTGAGATTCTCCATTTGCAAGTCAAGGGTATTTGGATCGGAATGTTGTTCGGAACATTTATCCAAACTCTACTGTTAATTATAATAACATACAAAACTAATTGGGACGACCAGGTAATTATAGCTCGTCATCGAGTTAACAGGTGGTCGAAGGAGAGTGCTGATCCTGAAAGAATTACATCAAATAATTAG 1461 0.4079 MEGDQEEKLLIKEKTSEEESSLVNKVWEESKLMWTVAAPAIFTRFSSFGVTIISQAYVGHIGSRELAAFALVFTVLIRFANGILLGMASALSTICGQAFGAKEFDMMGVYLQRSWIVLFSTAFCLLPLFLFTSPILKLLGQDENIAEVAETISLWSIPILFSFIVSFTTQTFLQSQSRNTIIAFLAAFSLITHVSLSWLLTMNFKLGIPGAMLSTILASWIPNIGQVIFITCGWCSDTWKGLSFLAFKDLWPVVKLSLSSGVMLCLELWYNTILVLLTGNLNDAEVQIDALSICLNISGWEMMISLGFMAAASVRVANELGKGSSKAAKFSILVSVLTSLAIGFFLFLFFLLLREKLAYIFTSNEEVANAVADLSPLLAISILLNSVQPVLSGVAIGAGWQSSVAYVNIGCYYVIGIPVGMVLGEILHLQVKGIWIGMLFGTFIQTLLLIIITYKTNWDDQVIIARHRVNRWSKESADPERITSNN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1072 486 TIGRFAM matE: MATE efflux family protein 39 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1072 486 Pfam MatE 262 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1072 486 Pfam MatE 39 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1072 486 CDD MATE_eukaryotic 29 462 IPR045069 GO:0042910|GO:1990961
Pvu1g1072 486 PANTHER PROTEIN DETOXIFICATION 13 471 - -
Pvu1g1072 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1072 Pvu-Chr1 24309312 24315443 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1072 K03327 - gmx:115333220 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1072 1 24309312 24315443 Pvu1g1072 1 24309312 24315443 ECH