Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1071 ATGGAGGGGAATCTAAAGCAGAAGTTGCTGAACAAAGAAATAACCTCAGAGCAAGAAAAAGAAGATGAATCATCGTTGACGAAGAAGGTGTGGAAAGAGAGCAAGTTGATGTGGATAGTTGCAGCACCAGCCATATTCACTAGGTTCTCCACCTTTGGTCTCAATATTATAAGTCAAGCTTTTATTGGTCATATTGGCCCAAGGGAACTTGCTGCTTTTGCTCTTGTCTTCACTGTTCTCATACGCTTTGCCAATGGTGTTCTGTTAGGAATGGCGAGTGCATTGTCAACACTTTGTGGACAAGCATTTGGTGCAAAAGAATATAGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTGTTCTTAACTGCACTTGTTCTTGTTCCTGTGTTCATTTTCACAAGCCCAATTTTGACACTTTTAGGCCAAGATGAGAGCATAGCACAAATGGCAGGAACCATTTCTCTCTGGTCAATTCCTATCATGTTTTCTTTCATTTTCTCATTCACTTGCCAGACATTCCTGCAATCTCAGAGCAAGAATGTCATCATTGCATTCTTGGCAGCTTTTGCGATAGTGATTCATGTTTTTCTCTCCTGGCTTTTGACAATGAATTTCAAGATGGGAATTCCTGGTGCAATGGTTTCAACAATTTTGGCATTCTGGATTCCTAACATTGGTCAACTCATATTTGTCACATGTGGTTGGTGCTCTGATACATGGAAAGGTTTCTCCTCTCTCGCATTCAAAGACCTCTGGCCTGTTATCAAGATGTCCCTTTCAGCTGGTGCCATGTTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTGTTAACGGGTAACATGGAAAATGCAGAGGTCCAAATTGATGCTCTAGCTATATGCATCAACGTCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGAAAAGGAAGCTCCAAAGCTGCGAAGTTTTCTATAGTTGTGACAGTGCTTACATCCTTTTCAATTGGGTTAATCTTGTTTCTAGTTTTCTTAACTCTAAGAGAAAAAATAGCCTATGTATTTACTACAAGCGAAGACGTGGCTATTGCTGTTGGGGATTTGTCACCTTTGTTGGCATTTTCTTTGTTACTAAACAGTGTTCAACCAGTTCTCTCAGGGGTTGCTATTGGAGCAGGGTGGCAGAGCACTGTAGCATATGTGAATATAGGGTGTTACTATGCCATAGGTATTCCTGTTGGAATATTACTTGGTAATGTTTTCCACTTGCAAGTTAAGGGTGTTTGGATTGGAATGTTGTTTGGGACACTAATTCAAACTGTAGTCCTAATTATATTAACCTACAGAACTAATTGGGATGAACAGGTAATGATAGCCCGTATCCGTATTAATAGGTGGTCTAAAGTGGATGTTGATCATGAAAGAATTAGATCAGATAATTAG 1473 0.4019 MEGNLKQKLLNKEITSEQEKEDESSLTKKVWKESKLMWIVAAPAIFTRFSTFGLNIISQAFIGHIGPRELAAFALVFTVLIRFANGVLLGMASALSTLCGQAFGAKEYSMMGVYLQRSWIVLFLTALVLVPVFIFTSPILTLLGQDESIAQMAGTISLWSIPIMFSFIFSFTCQTFLQSQSKNVIIAFLAAFAIVIHVFLSWLLTMNFKMGIPGAMVSTILAFWIPNIGQLIFVTCGWCSDTWKGFSSLAFKDLWPVIKMSLSAGAMLCLELWYNTILVLLTGNMENAEVQIDALAICINVNGWEMMISLGFMAAASVRVANELGKGSSKAAKFSIVVTVLTSFSIGLILFLVFLTLREKIAYVFTTSEDVAIAVGDLSPLLAFSLLLNSVQPVLSGVAIGAGWQSTVAYVNIGCYYAIGIPVGILLGNVFHLQVKGVWIGMLFGTLIQTVVLIILTYRTNWDEQVMIARIRINRWSKVDVDHERIRSDN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1071 490 CDD MATE_eukaryotic 33 466 IPR045069 GO:0042910|GO:1990961
Pvu1g1071 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 470 - -
Pvu1g1071 490 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1071 490 Pfam MatE 266 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu1g1071 490 PANTHER PROTEIN DETOXIFICATION 15 470 - -
Pvu1g1071 490 TIGRFAM matE: MATE efflux family protein 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1071 Pvu-Chr1 23998627 24001807 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1071 K03327 - gmx:100777237 795.808