Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1068 ATGAGCAACGACATATTTGATGGACAGTTGTTTTCTGAGAAGTTGTTGAATGTCAACAATTCACAACATAGCATTCAATCCTTGTCCCGTTGGTGTATTTCTCATCGGAAAAGAGCAAAAGAAATAGTTGAAACTTGGGATAAATTATTCAATGCTTCCCAGAAAGAGCAGTGTATCACTTTTCTATACCTGGCTAATGACATCCTGCAAAATAGTAGACGAAAGGGTAGTGAGTTTGTCAACGAATTCTGGAAAGTTCTTCCAGAGGCTCTAAGGCGTGTTTGTGAAAGTAGTGATGACTCTGGAAGGAATGCAGTGGCCAGACTAGTAAGTCTCATTACTCTACAAATTCTCTGA 357 0.3922 MSNDIFDGQLFSEKLLNVNNSQHSIQSLSRWCISHRKRAKEIVETWDKLFNASQKEQCITFLYLANDILQNSRRKGSEFVNEFWKVLPEALRRVCESSDDSGRNAVARLVSLITLQIL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1068 118 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 112 - -
Pvu1g1068 118 Gene3D - 4 114 IPR008942 -
Pvu1g1068 118 CDD CID_RPRD_like 9 111 - -
Pvu1g1068 118 ProSiteProfiles CID domain profile. 3 118 IPR006569 -
Pvu1g1068 118 SMART 558neu5 10 116 IPR006569 -
Pvu1g1068 118 Pfam CID domain 10 112 IPR006569 -
Pvu1g1068 118 SUPERFAMILY ENTH/VHS domain 17 111 IPR008942 -
Pvu1g1068 118 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1068 Pvu-Chr1 23719971 23727086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1068 K15559 - pvu:PHAVU_001G102900g 237.654