LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g1063	GAAAAAAAAGTGAAATGTAATTACTGCAACAAAATATTTAATGGAGGAATTTTCAGATTAAAACATCATCTTGTCGGAACAAGATATGACTCTGAACCTTGTGTATCAGTACCAGAAGAAATCAAAGTTTTAATGTTGAAAGTTGTCTCAGAAGCTAAAGATGCCTCATTGAAGAAAAGAAAGTTTAATAGTCTTGGACAAACTGATGGTGAGGAAGATAGTGAAAATGTCTCTAGCAAGATGTTTAAAAGTAAATCTTCATCTTCTGATGGTGTTCAAGCTACTCTGAATCAAATTGCCATCCCATTCAATGTTATTAGAAATCCAGCTTTTGCAAAAAAGTGTGACATGATTGGTAGATATGGTGTTGGCTATAAACCTCCAACATATCATGATATTAGAGAGAAGCTTCTGAAACAAGTCGTGGACAAAACTGATATAGAACTTGAAGAGTATAAGGATGAATGGAAGAGAACAGGTTGTACCATTATGTCTAATGGATGGACAGACAAAAAAAGACGGTCAATTTGTAATTTTTTAGTGAACAGTCGTAAAGGAACTGTGTTTCTATATTCATTAGATACCTCTGACATCTCAAAAACTGCAAATAAAGTATTGAAAATGTTGGATGATGCGGTAGAATTTGTTGGTGAGGAAAGTGTATTGCAGGTAGTTACTAATAATGCTGCAAATTTCAAGGCAGGTGGAGAGCTTTTGATGCAAAAAAGGGAGCACTTTTATTGGACTCCATGTGCTGCCCATTGTATTGATTTAATCTTTGAAGATTTTGAGAAGCAATTAAAGGTCCATCAAACTACTATCAAGAAGGGAAGAAGGATCACTACCTATATTTATGGTAGATCAATGTTAATTACCATTTTGAAAAAGTTTACGAATGGAAGAGACTTGATAAGGCCTAGAATGACTAGATTTGCCACAACATACTTCACTCTAGCTTGTTTGTATGAAATGAAAACATCATTGATGACCATGTTTAACTTTGAAGAATGGAAAACAAACAAGTTTGGAACTTCTCAAGAAGGGAGAAAAGTTCAAAATGTGGTATTAGATAGTCGATTTTGGAAGAATGTAAGTATATGCTTAAAAGTTGCTGCCCCTCTTATTGTGGTCCTTCGATTGGTAGATTCGGATGTAAAACCCACAATGGGATTTATATATGAGGAGATGGATTGCGCCAAAGAGAAGATTAAAAACAACTTTAATAATATCAAGAAAAGTTATGAACATGTTTGGAAAATCATTAATCAGAGGTGGAATAATCAACTTCATAGGCCTTTGCATGCAGCTTCCTATTACCTAAATCCCCAATTACACTATCAACCAAACTTTAGAAATGATGATGCTAAGGTGAAAGAGGGGTTGTACATGTGCATGAGAAGATTGGTTAATGACGTTGCAGAAAGAACAAAAATCAATTTGCAACTTACTAATTTTCACCATGCAAGAGGAATATTTTCTTTGGAAGATGCAAAGCTGGGTAGGAAAGGTATGTTACCTACAAATTGGTGGGAGATGTTTGGGGATAGAACTCCAGAACTAAATAGATTTGTTGTTCGAGTTCATACAAAAAGAAGATATTGTTTGCACCAAAAGAAAATGAATGACTTAGTTTATGTAATGTATAATTCGAAGTTGAGAAACAAACAAATTAGAAGATCTATTGCTCTTCCATTTGAAGACATTCAGTCCGATAATGAATGGATAACTGAAGGAGATAATTTTGTTGAGGTTGAGCAAACTCTACTTGAAAATGATGGTGTGAATGTTGACTTAGCTGGAGGAACAAGTTTAAATGATTCAATTCCAGATGTAGCTGATTTTGATAATAAAGTTTTTGATGATGATGTTGATGGTGATGAAGATGATGATGATGATGAACATGGTGATGATGAAGATGGAGATGATCATGAAGATCTTGGAGATGATTTCCTTATAGGATTAGATGAATGA	1971	0.342	EKKVKCNYCNKIFNGGIFRLKHHLVGTRYDSEPCVSVPEEIKVLMLKVVSEAKDASLKKRKFNSLGQTDGEEDSENVSSKMFKSKSSSSDGVQATLNQIAIPFNVIRNPAFAKKCDMIGRYGVGYKPPTYHDIREKLLKQVVDKTDIELEEYKDEWKRTGCTIMSNGWTDKKRRSICNFLVNSRKGTVFLYSLDTSDISKTANKVLKMLDDAVEFVGEESVLQVVTNNAANFKAGGELLMQKREHFYWTPCAAHCIDLIFEDFEKQLKVHQTTIKKGRRITTYIYGRSMLITILKKFTNGRDLIRPRMTRFATTYFTLACLYEMKTSLMTMFNFEEWKTNKFGTSQEGRKVQNVVLDSRFWKNVSICLKVAAPLIVVLRLVDSDVKPTMGFIYEEMDCAKEKIKNNFNNIKKSYEHVWKIINQRWNNQLHRPLHAASYYLNPQLHYQPNFRNDDAKVKEGLYMCMRRLVNDVAERTKINLQLTNFHHARGIFSLEDAKLGRKGMLPTNWWEMFGDRTPELNRFVVRVHTKRRYCLHQKKMNDLVYVMYNSKLRNKQIRRSIALPFEDIQSDNEWITEGDNFVEVEQTLLENDGVNVDLAGGTSLNDSIPDVADFDNKVFDDDVDGDEDDDDDEHGDDEDGDDHEDLGDDFLIGLDE*	657

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g1063	656	MobiDBLite	consensus disorder prediction	619	656	-	-
	Pvu1g1063	656	MobiDBLite	consensus disorder prediction	616	656	-	-
	Pvu1g1063	656	SUPERFAMILY	Ribonuclease H-like	150	551	IPR012337	-
	Pvu1g1063	656	MobiDBLite	consensus disorder prediction	64	79	-	-
	Pvu1g1063	656	PANTHER	OSJNBA0013A04.12 PROTEIN	2	59	-	-
	Pvu1g1063	656	PANTHER	OSJNBA0013A04.12 PROTEIN	103	571	-	-
	Pvu1g1063	656	Pfam	BED zinc finger	1	25	IPR003656	GO:0003677
	Pvu1g1063	656	MobiDBLite	consensus disorder prediction	64	88	-	-
	Pvu1g1063	656	Pfam	Protein of unknown function (DUF 659)	128	280	IPR007021	-
	Pvu1g1063	656	PANTHER	HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN	103	571	-	-
	Pvu1g1063	656	PANTHER	HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN	2	59	-	-
	Pvu1g1063	656	Coils	Coil	135	155	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g1063	Pvu-Chr1	23605940	23608203	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g1063	-		-	ccaj:109787912	801.971