Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1061 ATGGCTTCGGATGCTGATATGGAGGACTATGGATTTGAGTACTCAGATGAGGAGCAAGAGGAGCAAGATGTTGATATTGAGAATCAGTATTACAATTCAAAAGGTTTGGTTGAAACTGATCCAGAAGGTGCACTTGCTGGTTTTGCGGAGGTTGTGCGCATGGAACAAGAAAAGGCAGAATGGGGATTTAAAGCTCTAAAGCAAACTGTGAAGCTCTATTATAGACTTGGAAGGTATAAAGAGATGATGGAAGCCTACAGGGAGATGTTGACTTACATTAAATCAGCAGTGACTCGTAACTATAGTGAAAAATGCATAAACAGCATTATGGACTATGTGTCGGGTTCAGCTAGCCAGAACTTTGGTCTTCTGCAGGAGTTCTACCAGACAACTCTGAAAGCCCTTGAAGAAGCAAAGAATGAGAGATTATGGTTTAAGACAAATCTTAAGCTTTGTAAGATCTTCTTTGATATTGGGGAATATGGACGGATGAGTAAGATTTTGAAAGAACTTCACAAATCTTGTCAAAGGGAAGATGGTACAGATGACCATAAGAAAGGAACCCAACTTTTGGAGGTTTATGCAATAGAAATTCAGATGTACACAGAGACCAAAAACAACAAAAAACTCAAGCAACTTTACCAGAAAGCACTCACTATTAAGTCAGCAATTCCCCATCCGCGGATAATGGGAATAATCCATGAATGTGGGGGGAAAATGCATATGGCAGAGCGACAATGGGCTGAAGCAGCTACGGATTTTTTTGAAGCTTTTAAGAATTATGATGAAGCTGGGAATCAGAGGCGTATCCAATGCTTGAAATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAACCCTTTTGATGGGCAGGAGGCAAAGCCATACAAAAATGACCCTGAAATTTTGGCAATGACAAATTTGATAGCAGCTTATCAGCGGAATGAAATATTGGAATTTGAGAAAATCTTGAAGAGTAACAGACGTACCATCATGGATGACCCATTTATCAGAAATTACATTGAGGATCTTCTAAAGAATATCAGAACTCAAGTCTTACTGAAGCTCATCAAACCATATACGAGGATCAGGATCCCGTTTATATCTAAGGAACTTAATGTGCCTGAGAATGATGTCGAGCAGCTACTGGTATCTCTTATCTTGGATAACAGAATTCAAGGACACATCGATCAAGTCAACCGGCTCTTAGAACGCTCTGATAGGTCGAAAGGAATGAAGAAGTATACTGCCATAGACAAGTGGAACACACAGCTTAAATCCCTTTATCAAACTATCAGCAACAGAGTTGGTTAA 1320 0.3977 MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVRMEQEKAEWGFKALKQTVKLYYRLGRYKEMMEAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIFFDIGEYGRMSKILKELHKSCQREDGTDDHKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSKGMKKYTAIDKWNTQLKSLYQTISNRVG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1061 439 ProSiteProfiles PCI domain profile. 243 412 IPR000717 -
Pvu1g1061 439 Pfam PCI domain 306 406 IPR000717 -
Pvu1g1061 439 SUPERFAMILY "Winged helix" DNA-binding domain 335 411 IPR036390 -
Pvu1g1061 439 SMART PINT_4 341 423 IPR000717 -
Pvu1g1061 439 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 341 423 - -
Pvu1g1061 439 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g1061 439 PANTHER - 1 438 - -
Pvu1g1061 439 Gene3D - 64 439 - -
Pvu1g1061 439 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 1 438 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1061 K12176 - gmx:100788070 851.662