Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1032 ATGTGCCCTGGATCTTTTGATGGAACTCGTGCATCATATAAATACTTACTGTTCTCAAAGCAATTAGAGGATACAATGGAGAAGTTCGCCCTCGGAGAAATAAAAATCCTTATCTGCACAAATATAGTAGAAAGTGGGCTTGATATTCAAAATGCAAATACCATTATCATTCAGGATGTTCAGCAATTTGGCCTTGCACAGTTATACCAGTTGCGTGGAAGGGTTGGGCGAGCAGATAAGGAAGCACATGCATACTTATTTTATCCTGACAAAGGCCTGCTTTCTGATCAAGCATTGGAGAGGCTTGCTGCTATTGAAGAATGTCGTGAACTTGGTCAAGGCTTCCAACTAGCTGAGAAAGACATGGGTATAAGAGGTTTTGGTGCAATTTTTGGTGAACAACAATCAGGAGATGTTGGAAATGTTGGTGTTGATCTGTTTTTTGAGATGCTCTTCGAGAGCTTGTCCAAGGTTGAAGATCACTGTGTTGTTTCAGTTCCTTATCACTCGGTACAGGTTGACATGAACATAAATCCTCATCTCCCTTCTGACTACATTAATTATCTGGAGAACCCTATGAAAATTTTAAGTGATGCTGAGAGAGTTGCCGAGAAAGACATCTGGAGTCTGATGCAATTTACAGAGAATTTGCGCCGCCAATATGGCAAAGAGCCTCGCTCCATGGAGATTTTACTAAAGAAGCTTTACATGAGGAGAATGGCGGCTGATTTAGGGATAAGCAGAATCTACTCTTTAGGGAAGATGATCTTCATGAAAACAAACATGAGTAAAAAGGTATTCAAGCTGATGACAGAGTCCATGGCATCAGATTTACATAGAAAGTCGTTGGTTCTTGAGGGGGACCAAATTAAGGTATTCCAAAGAATTTCTTTATCTCTGAATTCTTTATATTGA 915 0.4 MCPGSFDGTRASYKYLLFSKQLEDTMEKFALGEIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKGLLSDQALERLAAIEECRELGQGFQLAEKDMGIRGFGAIFGEQQSGDVGNVGVDLFFEMLFESLSKVEDHCVVSVPYHSVQVDMNINPHLPSDYINYLENPMKILSDAERVAEKDIWSLMQFTENLRRQYGKEPRSMEILLKKLYMRRMAADLGISRIYSLGKMIFMKTNMSKKVFKLMTESMASDLHRKSLVLEGDQIKVFQRISLSLNSLY* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1032 304 SMART helicmild6 10 79 IPR001650 -
Pvu1g1032 304 SUPERFAMILY TRCF domain-like 167 291 IPR037235 -
Pvu1g1032 304 Gene3D - 16 166 IPR027417 -
Pvu1g1032 304 Pfam Helicase conserved C-terminal domain 19 78 IPR001650 -
Pvu1g1032 304 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 123 IPR001650 -
Pvu1g1032 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 155 IPR027417 -
Pvu1g1032 304 Gene3D - 170 301 IPR037235 -
Pvu1g1032 304 Pfam TRCF domain 176 262 IPR005118 GO:0006281
Pvu1g1032 304 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 19 291 - -
Pvu1g1032 304 PANTHER TRANSCRIPTION-REPAIR-COUPLING FACTOR 19 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1032 Pvu-Chr1 22158016 22163274 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1032 - - pvu:PHAVU_001G099400g 600.512